KEGG   Latimeria chalumnae (coelacanth): 102352006
Entry
102352006         CDS       T02913                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1-like
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04010  MAPK signaling pathway
lcm04145  Phagosome
lcm04148  Efferocytosis
lcm04310  Wnt signaling pathway
lcm04370  VEGF signaling pathway
lcm04510  Focal adhesion
lcm04517  IgSF CAM signaling
lcm04518  Integrin signaling
lcm04520  Adherens junction
lcm04530  Tight junction
lcm04620  Toll-like receptor signaling pathway
lcm04810  Regulation of actin cytoskeleton
lcm05100  Bacterial invasion of epithelial cells
lcm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102352006
   04310 Wnt signaling pathway
    102352006
   04370 VEGF signaling pathway
    102352006
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    102352006
   04518 Integrin signaling
    102352006
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102352006
   04148 Efferocytosis
    102352006
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102352006
   04520 Adherens junction
    102352006
   04530 Tight junction
    102352006
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102352006
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    102352006
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102352006
   05100 Bacterial invasion of epithelial cells
    102352006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102352006
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102352006
   04031 GTP-binding proteins [BR:lcm04031]
    102352006
Membrane trafficking [BR:lcm04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    102352006
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    102352006
  Macropinocytosis
   Ras GTPases
    102352006
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    102352006
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102352006
  Exosomal proteins of other body fluids (saliva and urine)
   102352006
  Exosomal proteins of colorectal cancer cells
   102352006
  Exosomal proteins of bladder cancer cells
   102352006
GTP-binding proteins [BR:lcm04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    102352006
SSDB
Motif
Pfam: Ras Roc GTP_EFTU Arf
Other DBs
NCBI-GeneID: 102352006
NCBI-ProteinID: XP_006012168
Ensembl: ENSLACG00000022526
UniProt: M3XL06
LinkDB
Position
Un
AA seq 163 aa
MLFFRFDHYSANVMVDSKPVNLGLWDTAGQEEFDRLRPLSYPQTDIFLICFALDSPASYE
NVRAKWFKEVEHYCPGTPIILVGTKLDLRDDKDIIERLREKRLSPISYPQGLAMAQEIKA
VKYVECSALTLRGLKIVFDEAIRAVVNPPPTKRMKRNHKCEVL
NT seq 492 nt   +upstreamnt  +downstreamnt
atgttgttttttaggtttgatcactattccgccaacgtgatggtggacagtaaacctgtg
aacctgggactctgggatacagcaggacaggaggaatttgaccggcttagacccctctcc
tacccgcaaacggacatttttctcatttgttttgctctggacagcccggcctcttatgaa
aatgtccgtgccaagtggtttaaagaagtggaacattactgccctggcactcccataatc
ctcgtgggcaccaagctggacctccgggacgacaaggacatcatcgagaggctgagagag
aaaagactttcgcccatcagttacccacaaggccttgcaatggctcaagaaatcaaagcg
gtgaagtacgtggagtgttcggcactgacgctgcgcggtctgaagattgtgtttgatgag
gcaatccgggccgttgtcaaccctccgcccaccaagaggatgaagaggaatcataagtgt
gaggtgctctga

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