Latimeria chalumnae (coelacanth): 102352038
Help
Entry
102352038 CDS
T02913
Symbol
TOP3A
Name
(RefSeq) topoisomerase (DNA) III alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03440
Homologous recombination
lcm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102352038 (TOP3A)
03460 Fanconi anemia pathway
102352038 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcm03032
]
102352038 (TOP3A)
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102352038 (TOP3A)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
102352038 (TOP3A)
DNA replication proteins [BR:
lcm03032
]
Eukaryotic type
DNA Topoisomerases
102352038 (TOP3A)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
102352038 (TOP3A)
FA (Fanconi anemia) pathway
102352038 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
HypA
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
102352038
NCBI-ProteinID:
XP_005997514
Ensembl:
ENSLACG00000008893
UniProt:
H3AKB8
LinkDB
All DBs
Position
Un
AA seq
999 aa
AA seq
DB search
MIFQLRRFVHSGIALSRSRKMIRRYQIKKVLCVAEKNDAAKGIADIMSNSRMRRREGISR
FNKIYEYECHMFGQNVTVIMTSVSGHLLGLEFKAPFQKWHSCNPVVLFDAEVEKYCPDNY
VDVKKTLEREVRQCQALVIWTDCDREGENIGFEIIQVCKAVKQNLQVSRAHFSEITPRSI
RMACENLVEPNQNINDAVDVRQELDLRIGAAFTRFQTLRLQKIFPNVLSDQLISYGSCQF
PTLGFVVERFKAIQAFIPETFFKIKVTHESEDGTVDFNWKRNRLFNHTACLVLYQICMED
PVATVIDVTSKPKSKWRPLPLDTVELEKLASRKLKIGAKETMKIAEKLYTQGYISYPRTE
TNMFPPDLNLSSLVQQQTGDQRWGAFAQGILDRGGPTPRSGNKSDQAHPPIHPTKYTNAL
QGNEQRLYEFIVRHFLACCSQDAQGQETIVEIDIAKERFVAHGLMIIARNYLDVYPYDKW
NAKVIPVYEMGSRFQPTTIEMLDGETSPPQLLTEADLISLMEKHGIGTDATHAEHIETIK
SRMYVGLTPEQRFLPGELGMGLVEGYDSMGYEMSKPDLRAELEADLKLISEGKKDKFTVL
RQHVQKYKQVFVEAVAKAKKLDEALSLYFGEASQVTQIEEMQMEIPRPVRKCPQCNRDMI
LKTKKDGGFYLSCMGYPSCKTAVWFPSSVLEVSIDDSVCPTCKPHPVHGLKFKFKRGSLP
ATMPLEFVGCIGGCDETLREVLDLRYLQGGGAAPQSGSQTSHQRQQISQPQSWKTSVAAN
VSRVVELQPTSNENNEVVCNCGQEALLLTVRKEGPNQGRQFYKCSSGNCSFFLWADQRPE
GGENAGNRSIPEPARAPLGRASVGFGGNTGSGFRGGFGQPGNKNDFGGGSSATCRCNQPA
VTRTVQKDGPNKGRLFHTCSKPREQQCGFFQWADENVPPESGGGFSAPQFGAAGSSGGSG
MKSKRAGTNASEKGPTAKKRTCGICRQPGHTKVTCPQKR
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgattttccaactcaggcggtttgtacatagtggaattgccttgtcccggagtaggaag
atgatccgaaggtatcagattaagaaagtcttgtgcgtagcggagaaaaatgacgctgct
aaagggattgctgatatcatgtcaaatagccgaatgagaagaagagaaggcatctcaagg
tttaataagatctatgagtatgagtgtcatatgtttgggcagaatgtcactgtgataatg
acctcagtttcaggccacctgttaggtttagaattcaaggctccatttcagaaatggcac
agttgtaatcctgtcgttctctttgatgctgaagtcgagaagtactgtcctgacaactat
gtagacgtcaagaaaaccttggagcgagaggtccgccagtgccaggccctggtaatatgg
actgattgtgatcgagaaggagaaaatattggctttgaaataatacaggtctgcaaagca
gtgaagcagaatttgcaggtgtccagggcccatttctcagagatcacaccacgctccatc
aggatggcctgtgagaacctagtggaacccaatcagaatatcaatgatgctgtggatgtc
cgtcaggagctggatcttcggataggggctgcatttactagatttcagactctaagactt
cagaagatctttccaaatgtgttatcggatcagctgatcagttacggaagctgtcagttc
ccaactctgggttttgtggtggaaagattcaaagccatccaggccttcattcctgaaacc
ttttttaaaattaaagtgacacatgaaagtgaggatggaactgtggacttcaactggaaa
agaaaccgcctctttaaccatacagcgtgtcttgtactttatcagatatgcatggaggat
ccagttgctacagtaatagatgtaacttctaaacccaagagtaaatggagaccattgccc
cttgacacagtggaacttgaaaagctggcttcccgaaagctgaaaattggtgccaaagaa
accatgaaaattgcagagaaactgtacacccagggttatattagctatccacgtacagag
acaaacatgtttccacctgatctaaacctgtcctctctggtacagcagcagactggggac
caacgatggggtgcttttgcacaggggattctggacaggggagggccaactccaagaagt
gggaacaaatcggatcaggcccaccctcccattcaccccactaaatacaccaacgctctg
caggggaatgaacagcgattgtatgagtttatagtccgccatttcctagcttgttgctcc
caggatgcacaagggcaggaaacaatagtggagattgatattgctaaggagaggtttgtt
gcccatgggcttatgatcatagctaggaactacctggatgtatatccctatgacaagtgg
aatgctaaagttattccagtgtatgagatgggctctcggttccaacccaccactatagag
atgctagatggcgagaccagcccaccccaactccttactgaagctgaccttatttctctc
atggagaaacatggcattggcactgacgcaacccatgccgagcacattgagaccatcaag
tcgcgcatgtatgtgggactgactcctgaacagagattcctgccaggggagctgggtatg
ggcttggtagaaggctatgattcaatggggtatgagatgtccaagcctgacctccgagct
gagctggaagcagacttgaagttgatttctgaagggaagaaagataagttcactgtcctg
agacaacacgtgcagaaatacaagcaggtttttgttgaagcagtagctaaagccaagaag
ttggatgaggcactctccctttacttcggagaggccagtcaagtcacccagatagaggaa
atgcagatggagattccacgacctgtccggaagtgcccccaatgtaacagggacatgatt
cttaaaaccaagaaagatggcggattttacctgtcttgcatgggttacccaagctgtaag
acggctgtatggtttccgagttctgttctggaggtcagcatagatgacagcgtgtgtcct
acctgtaaaccacatccagtgcacggattgaaatttaaattcaagagaggcagtctccca
gcaacgatgccccttgagtttgttggctgtattggaggttgtgatgaaacgctgagggag
gttttggacctgagatacttacaaggagggggtgcagcacctcagtcgggcagccaaacg
agccaccagcgccaacagataagccagccacagagttggaaaaccagcgttgctgcaaat
gtatcacgagttgttgagctgcagcccaccagcaacgagaacaatgaggtggtctgcaac
tgcgggcaagaagcactacttcttactgtccgcaaagagggacccaatcaggggcggcag
ttttacaagtgcagctcgggaaactgcagtttctttctgtgggcagatcagcgtccagaa
ggcggtgaaaacgccgggaataggagtattccagaacctgctcgtgctccacttgggagg
gcctcagttggctttggaggcaacacggggtctggatttagaggtggctttggacagcca
ggaaacaaaaatgactttggtggaggaagcagtgcaacttgcaggtgcaatcagccagca
gtcacacgaacagtccagaaggacggacccaacaagggacggctgtttcacacctgttcc
aaaccaagggaacaacagtgtggcttcttccagtgggcagacgaaaatgttccaccagaa
tctggaggaggttttagcgctccgcagtttggagctgctggatcgtctggagggtcggga
atgaaaagtaaaagagcaggcaccaacgcttctgaaaaaggccccactgccaagaagaga
acctgtggaatctgccgccagccaggacataccaaggtgacatgccctcagaagagatga
DBGET
integrated database retrieval system
