Latimeria chalumnae (coelacanth): 102352076
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Entry
102352076 CDS
T02913
Symbol
FDFT1
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00100
Steroid biosynthesis
lcm01100
Metabolic pathways
Module
lcm_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102352076 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lcm01006
]
102352076 (FDFT1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102352076 (FDFT1)
Prenyltransferases [BR:
lcm01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102352076 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
SCC3_C
Motif
Other DBs
NCBI-GeneID:
102352076
NCBI-ProteinID:
XP_014351856
Ensembl:
ENSLACG00000007627
LinkDB
All DBs
Position
Un
AA seq
416 aa
AA seq
DB search
MMDMLKSLGHPEEMYNLFKFKLGGCRAVLPKLDYDSMSDSLKTCYMYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMTIPLSSKVPMLTGFHTYLYQPEWRYTQSQEKDR
QVLEDFPTISLEFRNLAKVYQDVIADICHQMGVGMAEFLEEKVGTLQEWDKYCHYVAGLV
GIGLSRLFSASELEEPVVGQDTQLSNSMGLFLQKTNIIRDYLEDLQEGREFWPRQVWSKY
AEKLSDFSRPENIEAALQCLNELITNALGHVPDVLTYLSRLRNQSVFNFCAIPQVMAIAT
LAACYNNPQVFRGVVKIRKGQAITLMMDATNMEAVRAMMYQYSEEIHQKVQSTDPSSTQT
EDILCSIRSQSLPDGSLASHSHLSPFYISCAMLLAALSWQYLSSSSQSSDEVLHGQ
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatggacatgttgaagtctctgggtcacccagaggaaatgtacaacctgttcaagttc
aagctgggaggctgcagggccgtgctgcccaaactggactatgactcgatgagcgacagc
ttgaagacctgctacatgtacctgaaccagaccagccggagcttcgccgctgtcatacag
gcgctggacggggagctcaggcacgctgtgtgtatattttacctggttcttcgtgctctg
gataccgttgaagatgacatgaccatcccactgagctccaaggtgccaatgttgaccggt
ttccacacctacctgtaccagcctgagtggagatatacccagagccaagagaaggacagg
caggtgttagaggacttccccacgatttcactggaattccggaacttggcaaaagtttac
caggacgtgattgctgacatctgccaccagatgggagttgggatggcagaattcctggag
gagaaagtgggaacgttgcaggagtgggacaagtactgccactacgtagcagggctggta
gggatcggcctctctcggctcttctcggcctcggagctggaggagcccgtggtgggacag
gacacccaactctccaactccatggggctcttcctacagaaaactaacatcatccgggac
tacctggaggacctgcaggagggcagggagttctggcccagacaggtttggagtaaatat
gcagagaagttgtctgatttctcccgacctgagaacatcgaggcagctttgcagtgtctg
aacgagctgatcaccaacgccctgggccatgtccccgacgtgctgacgtacctgtccaga
ctgcggaaccaaagcgtcttcaacttttgcgctattccacaggtgatggccatcgccacg
ctagcagcctgctacaataacccccaggtgttccgaggcgtggtgaaaatccgcaagggg
caggcgattacgctgatgatggatgcaaccaacatggaggccgtgagagccatgatgtac
cagtattcagaggagattcaccagaaagtacagagcacggatccctcctccactcagacc
gaagacatcctgtgttcgatccggagccagagcctcccagacggctccctggcctctcac
agccacctctcccccttctacatctcctgcgccatgttgctggcggccttgagctggcag
tacctgagctccagctcccagagctccgacgaagtcctgcacgggcagtga
DBGET
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