Latimeria chalumnae (coelacanth): 102352176
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Entry
102352176 CDS
T02913
Symbol
MSI2
Name
(RefSeq) musashi RNA binding protein 2
KO
K14411
RNA-binding protein Musashi
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102352176 (MSI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102352176 (MSI2)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102352176 (MSI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
SET1_RBD
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
102352176
NCBI-ProteinID:
XP_014346849
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All DBs
Position
Un
AA seq
405 aa
AA seq
DB search
MEADGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLKDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYSYQ
FPGFPTAAYGPVAAAAVAAARGSGFPEYGFYPSPGDQRAPLSFADYGSMGPRAAQMLRSE
HAASASNSPLHHLSSPDQFKSPVLNSYSAQPNFGAPASPAGTNPARPGGFPGANSPGPVA
DLYGTASQDSGVGNYISAASPQPGSGFGHGIAGPLIATAFTNGYH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagacgggagccaagcaacctctggaagcccaaacgactcgcagcacgacccc
ggtaaaatgtttatcggcggcctgagctggcagacatccccagatagccttaaagactat
tttagcaaatttggagaaattagagaatgtatggtcatgcgagatcctacaacaaaacgc
tccagaggcttcggttttgttacgtttgccgatcctgcaagtgtagataaagtattagct
cagccccatcatgaattagattccaagacgattgaccctaaagttgcttttccccgacga
gcacagcccaagatggtcacaagaacaaagaaaatatttgtaggtggattatctgctaac
acagtagtggaagatgtaaagcaatactttgagcagtttggcaaggtagaagatgccatg
cttatgtttgataaaactactaacagacatagaggatttggctttgtaacttttgaaaat
gaagatgttgtggaaaaagtctgtgaaattcatttccatgaaatcaataacaaaatggta
gaatgtaagaaagcacagccaaaagaagtgatgttcccaccagggacaagggggcgagcg
cgaggattaccgtacactatggatgcattcatgctcgggatggggatgctgggttaccca
aattttgttgcaacatatggcagaggatatcctggatttgcccccagctacagctatcaa
ttcccaggttttccaacggcagcctacggaccagtggcggcagcagcagtggcagcagca
agaggatcagggttcccagagtatggtttctatccatcgcccggtgaccaacgggctcca
ttatcgtttgcggattatggttccatgggacctcgggctgctcagatgctacgtagtgag
catgctgcctcagcaagtaattcacccctccaccatctttccagcccggatcagtttaag
agcccagtcctgaatagctacagtgctcaaccgaattttggcgcacccgcttccccggca
ggcaccaatccagcccggccaggaggattcccgggggcgaacagcccaggcccagttgca
gacctctacggcacagccagccaggattccggcgttggtaactacataagcgctgcaagc
ccccagccaggttcaggctttggacatggaattgctggaccgttgattgcgacagctttt
acaaatggataccattga
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