KEGG   Latimeria chalumnae (coelacanth): 102352265
Entry
102352265         CDS       T02913                                 
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03030  DNA replication
lcm03410  Base excision repair
lcm03420  Nucleotide excision repair
lcm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    102352265 (RFC2)
   03410 Base excision repair
    102352265 (RFC2)
   03420 Nucleotide excision repair
    102352265 (RFC2)
   03430 Mismatch repair
    102352265 (RFC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcm03032]
    102352265 (RFC2)
   03036 Chromosome and associated proteins [BR:lcm03036]
    102352265 (RFC2)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102352265 (RFC2)
DNA replication proteins [BR:lcm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    102352265 (RFC2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    102352265 (RFC2)
Chromosome and associated proteins [BR:lcm03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    102352265 (RFC2)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     102352265 (RFC2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    102352265 (RFC2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid nSTAND_NTPase5 AAA_22 AAA_14 AAA_16 Mg_chelatase Viral_helicase1 AAA_11 AAA_assoc_2 Rad17 RuvB_N DNAX_ATPase_lid AAA_19 nSTAND3 AAA_18 AAA_5 MipZ AAA_28 AAA_24 AAA_25 Gp44_lid AAA_30 AAA_23 NTPase_1 ABC_tran SLFN-g3_helicase RNA_helicase MeaB FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 102352265
NCBI-ProteinID: XP_005988660
Ensembl: ENSLACG00000018591
UniProt: H3BGZ1
LinkDB
Position
Un
AA seq 361 aa
MEVEMEEGFTDPKPERATAEPAKESNGAAVPSSSGSKAGTYELPWVEKYRPLKLSEIVGN
EETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGI
DVVRNKIKLFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNA
SDKIIEPIQSRCAVLRYSKLTDAQVLARLMQVIEKENIQCTDDGLEAIVFTAQGDMRQAL
NNLQSTHSGFGFVNSDNVFKVCDEPHPLLVKEMIQHCVNANIDEAYKVVAHLWKLGYSPE
DIIGNIFRVCKTFQMPEYLKLEFIKEIGYTHMKITEGVSSLLQMAGLLARLCQKTAAPAA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaggtggaaatggaagagggcttcactgaccccaagccggagagagcgacagcagag
cctgctaaagaaagcaacggggctgccgtgccctcctcctcggggagcaaagcagggacg
tatgagctgccttgggttgaaaaatacagaccattgaagctgagtgaaattgtgggaaat
gaagaaactgtcagtaggctggaggtatttgcaagagagggtaatgtacccaatatcatc
attgcaggtcctcctggtacaggtaagacgaccagcatactctgtttggcacgtgcactg
ctgggccctgcattgaaggatgctgtactggaactcaacgcctcaaatgacagaggcatc
gatgttgtaagaaacaaaattaaactatttgctcagcagaaggtcactctccctaaaggc
cgtcataagataataattttggatgaagcagacagcatgactgacggagctcagcaggcc
ctcaggagaacaatggagatttactccaaaaccactcgctttgcactagcatgtaatgcc
tcagacaaaattatagagccgatccagtcccggtgcgctgtactgcgctacagcaaactg
acagatgcgcaggtgctggccaggctgatgcaggtcattgaaaaggagaacattcagtgt
acggatgatggactggaggcgattgtcttcactgcacagggagatatgagacaggctttg
aacaatttacagtcaactcattctggctttggctttgttaacagtgataacgtgttcaag
gtatgtgatgagcctcaccccttgctggtaaaggaaatgatacagcattgtgtcaatgca
aacattgatgaggcatacaaggttgttgctcacctgtggaagctgggttactcacccgag
gatatcatcggcaacatcttcagagtgtgtaaaaccttccagatgcccgagtacctcaag
ctggaatttatcaaggagattggatacacccacatgaagattacagagggggtgagctct
ctactgcagatggcaggactgcttgcccgattgtgccagaagacagctgcccctgccgcc
agttag

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