Latimeria chalumnae (coelacanth): 102352317
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Entry
102352317 CDS
T02913
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102352317
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
IstB_IS21
Alkyl_sulf_C
Motif
Other DBs
NCBI-GeneID:
102352317
NCBI-ProteinID:
XP_005998038
Ensembl:
ENSLACG00000013391
UniProt:
H3AZZ0
LinkDB
All DBs
Position
Un
AA seq
615 aa
AA seq
DB search
MAPAVSMPAPVCLIENTPNGELLVNQKALRILSSITEPVVVVSIVGLYRTGKSYLMNKLA
GKMKGFSLGSTVQSHTKGIWMWCVPHPHEPNQTLVLLDTEGLGDVEKGDQKNDCWIFALA
VLLSSTLVYNSMGTIDQYALEKLHYVTELTELIKVKSSDNEEDDSTQYARFFPAFIWTVR
DFTLELKVNGHSITEDEYLDNALKLKPGCSRKVQEYNLLRGCIRNFFPSRKCFVFDCPTS
RENLQRMEELDESKLDPRFLSQAGKFCSYVFNSTKPKTLKGGHTVTGALFGTLAVTYVDT
IRSGSVPCLENAVLTLSQIENTAAVQDALSHYQKKMSEHVQLPTETVADLLKIHAQCETE
ATKIFMKRSFKDENQEFHQDLMRSVLQSYEEYCRKNEQASAAHCKALLTRLFHAMEEKIS
QAIYLCPGGYQRYIQDQKGALDTYRAQPGKGIKADEVLQEFLKSKEPVTNSILLADQSLS
QKEKEMEEERVKAEAKELQMKVMKEAQEALEQEMKDQQRSYKEHVQQLEVKMEADRQKLQ
KEQQTLLDQKLKEQQSLLEEGFKEKADVMKQEIRALQEEAKRNKSSSLSSVLETFTTIAM
AVLPRLLLTKTSRFR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggctccagcagtatccatgccggccccggtgtgcctgatagagaacacacccaacggg
gagctgctggtgaaccagaaggcccttcggatcctgtctagcatcacagagccggtggtg
gtggtgtccattgtggggttgtatcgtactgggaagtcctatctgatgaacaagctggct
gggaaaatgaaaggtttctccctggggtcgacggtgcagtcccacaccaaagggatctgg
atgtggtgcgtccctcaccctcacgaacccaaccagaccctggtactgctggacacagag
ggactgggagacgtggaaaagggggatcagaaaaatgactgctggattttcgctctggcc
gtcctgttgagcagcacccttgtgtacaacagcatggggactatagaccagtacgccctg
gaaaaactccattacgtgactgaactgacggaactcatcaaagtgaaatcatctgacaac
gaggaagatgactccactcagtacgcacggttcttcccagcattcatctggacagtgcga
gacttcactctggagctgaaggtcaatggacattccatcacagaggatgaatacctggac
aatgccctcaaattaaagcctggttgcagcagaaaagtacaagagtataatctgctgagg
ggatgcatccggaatttcttcccgtcccggaagtgctttgtctttgattgcccaacctcg
agggagaatctccagcgcatggaggagctcgatgaaagcaaactggacccaaggtttctg
agccaggcagggaagttctgcagttatgtgttcaactccacaaagcccaaaactctgaaa
ggcggacacactgtaactggagcgttgtttggtactcttgctgtaacttatgtggacacc
attcgcagcgggtcagttccatgcctggagaacgcggtgttgacgctgtcacagattgag
aataccgcggcggtccaggatgccctctcacactaccagaagaagatgagcgaacacgtg
cagcttcccaccgagaccgtggcagacctcctgaagatccacgcgcagtgcgagacggaa
gccaccaaaatcttcatgaagcgttcttttaaggatgaaaatcaagaattccaccaggac
ctgatgcgttctgtgctgcagagctatgaggagtactgccgtaagaatgagcaggcgtca
gcagcccactgcaaggcccttctcacacgcctgtttcacgcaatggaagagaagatctca
caggcgatttacctttgtcccggtggataccagcgctacatacaagaccagaaaggagcg
ctggacacatacagagcccagcctgggaaaggcataaaggcagatgaagttctccaggaa
ttcctcaagtcaaaggagccggtcaccaactccattctcctggcagatcaaagcctttct
caaaaggagaaagagatggaagaggaacgagtgaaggccgaagccaaggagctgcagatg
aaggtaatgaaagaggcacaggaagcccttgaacaggagatgaaggaccagcagaggagc
tacaaggaacatgtgcaacagctggaggtgaagatggaggcagacagacagaaactgcag
aaggagcagcagactctcctggaccagaaactcaaagaacaacagtcgttactggaagaa
ggttttaaggagaaggctgatgtaatgaagcaggagatcagagccctacaggaagaagca
aagaggaacaagtcctcatctctctcgtcagttttagaaacttttaccactattgcaatg
gcagttctccccagattacttcttactaaaacatcacgtttccgttag
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