Latimeria chalumnae (coelacanth): 102352427
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Entry
102352427 CDS
T02913
Symbol
NFATC4
Name
(RefSeq) nuclear factor of activated T-cells 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04020
Calcium signaling pathway
lcm04148
Efferocytosis
lcm04218
Cellular senescence
lcm04310
Wnt signaling pathway
lcm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102352427 (NFATC4)
04020 Calcium signaling pathway
102352427 (NFATC4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102352427 (NFATC4)
09143 Cell growth and death
04218 Cellular senescence
102352427 (NFATC4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102352427 (NFATC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102352427 (NFATC4)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
102352427 (NFATC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
102352427
NCBI-ProteinID:
XP_006005383
LinkDB
All DBs
Position
Un
AA seq
1130 aa
AA seq
DB search
MGAAACEDEELEFKLIFGEEADTPPEAVLPTHSTDFEPDDSAQYHSLNEAPPTFTVIQPI
GIPCHGASNRAGMHSPPPRPALDRDFDATYESQPARYVQVGGSRVLECPSIRITTISPQN
GHGDFEEDFCPNGWDSTPSERLSRDYLYLPLDPYSYRDASLSPSPASSLSSRSWFSDASS
CESLHQICDDVDSELNEATSRFTLGSPLGSPRGSSPRLWPHYDPCLSPREDNLLSPQVPA
SLCSSRPNSPCGKRRYSSSEAYFSASPHSSPTPSPALSRRGSITDEMFTGEGPLLKELAP
CSSPFDYGPSEVDNIPQKTRKTSAEQTVSLSRKQEHSGNGGSKGALPTTGGEDEGPGMYS
PVRKENAGMDYLAVPSPLAWSKARIAGHSPVFRSSALPPLDWPLPSQYEQYELKIEMQPR
THHRAHYETEGSRGAVKASPSGHPMVKLSGYNEKPLTLQMFIGTADERNLRPHAFYQVHR
ITGKMVATSSYEAMAGSTKVLELSLLPENNMVANIDCAGILKLRNSDIELRKGETDIGRK
NTRVRLVFRVHIPQGNGKVVSLQTASVPIECSQRSAQELPQIESYSINTCSVNGGEEVIL
TGSNFLPESKVIFIEKGPDGKLQWEEEAKVNRIRSNESSLVVEVPQYYTKAVQRPIQVYF
YVSNGKRKRSPTQSFRYLPVILKEEPCNDIQMRNVPPVQAPAAMATSTNNCTRGYADRPL
DPVEGSMNTLTTQQKGSYPSVNQPCMTTLKPPASYQLANSSVPNANTFLSSQTPPPHRPR
FLGPSYDASKGGPPSCNGGFHGSPHVVELMDPFPSAYSTPQDNEMTTGGLFVPYVSKLSS
SISASLIGCGDTRSSLPSSSKTLSVPTCASQSSTGILESTGHPPRLLPDIHMHQPLSSGP
NTHYNYGNCSYHKMAFPSTPSGPTNVFSLLSQGEPAFSSHSFSQTMNKLPPASYEIPKLE
STLLSLQGSQTFSSSLLDMLHTDKPPAYSPHQLEHLPAYSQATSSVVPHQDSPQNSHGQS
TPTSGACDATSTHHMATHCHTDSQENIESPPQYGNLSIGGHTTQNFDSPGLEEGTQQGKP
VAPEYESPFQNVPIQGFTLEEVSELIRQDLSDFPEAPCGGGAKHVNTSQN
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagcagcgtgtgaggatgaagagctggagtttaagctgatctttggagaagag
gcagacaccccgcctgaggcagtgcttccaacacacagcacagattttgaaccagacgac
tctgcacagtaccacagcctgaatgaggccccgcccactttcacagtgatccagccaatt
ggaatcccctgtcatggcgcctccaaccgtgcaggtatgcactcgccccctccccggcct
gccttggaccgcgacttcgatgccacttacgagagccagcccgcccgctacgtgcaggtg
gggggttcccgggtcctggagtgccccagcatccgcatcaccaccatctcccctcagaac
ggccatggggacttcgaagaggacttctgccccaacggctgggacagcaccccctcggag
agactgtctcgggactacctctacctgccgctggacccttacagctatcgggatgcttcc
ctcagccccagccctgccagcagcctgtcctcccggagctggttctccgacgcctcctct
tgcgaatccctccaccagatctgcgacgacgttgactcggaactgaacgaggccacctcc
cgcttcacactgggctccccgctggggtcccccaggggctcctcgcctcgcctgtggccc
cactatgatccttgcctctccccccgggaggacaacttgttgagcccccaagtgccggca
tccctgtgctcctcacggcccaactcaccttgcggcaagcggcgctactccagctctgag
gcctacttctctgcctccccccattcctctccaaccccctctccagccctctccagacga
ggaagcatcaccgatgagatgtttacaggtgaggggccacttttgaaggagctggctccc
tgcagctccccctttgactacgggccctccgaagtggacaacatcccccaaaagacccgc
aagacctcagctgagcagactgtctcgctatcccggaagcaagagcacagtggcaatgga
ggcagcaagggggccttgcccactacggggggtgaggacgaggggccaggaatgtatagt
cctgtccggaaggagaatgccgggatggattacctcgcagtgccgtctccgttggcctgg
tccaaggccaggatcgctggacacagtcctgttttcagaagctcagccctcccccctctg
gactggcccctccccagccagtatgagcagtacgaactgaagattgagatgcagcctcgt
acccaccaccgagcacactacgagactgaaggtagccgaggggctgtcaaggcgtctccc
agcggacaccccatggtcaaactctcaggctacaacgagaagcccctgacactccagatg
ttcattgggacggcggacgagcgtaacctccgtcctcacgccttctaccaggtccaccgc
atcacgggcaaaatggttgccacctccagctatgaggccatggcaggaagcaccaaggtc
cttgagctgtctctgctgcctgaaaacaacatggtcgccaacatcgactgtgcagggatc
ctgaaactccgaaattccgacattgagctgcggaaaggagaaacggacattggcagaaag
aacacccgggtgaggctggtgttccgggtccacattccccagggaaatgggaaggtggtt
tccttacaaacagcttctgtaccgattgaatgctctcagcgttccgcacaagagttacca
cagatcgagagctacagcatcaacacctgctctgtgaatggaggggaagaagtgatcctg
actggctccaatttccttcctgagtcaaaggtcatcttcattgagaaaggtccagatggc
aagctgcagtgggaagaagaggcaaaagtgaacagaataagaagtaacgagtccagccta
gtggtggaggtgccgcagtactacacaaaggctgtccaaaggcctatccaggtctacttc
tatgtctccaatgggaagagaaagaggagccccacccagagcttcaggtacctgccagta
attttaaaggaagaaccctgcaatgatatccaaatgagaaatgtcccaccggttcaggca
cctgctgccatggcaacatccaccaacaactgcacaagaggctatgcagacagacccttg
gaccccgtagagggcagcatgaacacactgaccactcaacagaagggctcctacccttcc
gtaaatcagccgtgcatgacaacgttaaaaccaccggcttcctaccagttggccaacagc
agcgttccaaatgccaataccttcctcagttcccagactccaccaccccacaggcctcgt
tttcttgggccaagctatgatgcaagcaagggaggaccccctagctgtaatggtggcttc
catgggtcacctcatgttgtagagctaatggaccctttcccatctgcttattccacacca
caggacaacgagatgactacaggaggcctgtttgtgccctatgtgtccaagttgtcttcc
tcaatatctgcgtccttaataggctgtggagataccagaagttcactcccatctagctcc
aaaacccttagtgtgcccacatgtgcctcccagtccagtactggcattcttgagtctact
ggccacccaccaagattgcttccagacatccacatgcatcaacccttatcctctggaccc
aacacccactataattatggcaattgtagctaccacaaaatggccttcccatccacacca
tcagggcccaccaatgtattctctttactgtcacagggtgagccagccttctcttcacac
tccttttctcagactatgaacaagcttcctccagcctcctatgagattccaaagttggaa
tcaacacttctaagtcttcaaggctcccagactttctcctcatccttgttggacatgtta
cacacggacaagccacccgcctactcaccgcaccaactggagcacttgcctgcctactca
caggctacgagctctgtagttccacatcaagactcgcctcagaactcacatggccaatcc
acacccaccagtggtgcttgtgatgccacatccacacaccacatggcgactcactgccac
acggattcacaagaaaatatagagtcaccaccacagtatggcaacctaagcattgggggt
cacacaacacagaactttgacagccccggcttagaggaaggaacgcaacagggcaagcca
gttgctccagagtacgagagtccctttcaaaatgttcccattcaaggattcaccttagaa
gaagtaagtgagctgataagacaagacctgagcgatttcccagaagccccgtgtgggggt
ggagccaagcatgtaaacacaagccagaactga
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integrated database retrieval system
