Latimeria chalumnae (coelacanth): 102352480
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Entry
102352480 CDS
T02913
Symbol
ERCC1
Name
(RefSeq) ERCC excision repair 1, endonuclease non-catalytic subunit
KO
K10849
DNA excision repair protein ERCC-1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03420
Nucleotide excision repair
lcm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102352480 (ERCC1)
03460 Fanconi anemia pathway
102352480 (ERCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102352480 (ERCC1)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
102352480 (ERCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad10
ZNHIT3_C
Motif
Other DBs
NCBI-GeneID:
102352480
NCBI-ProteinID:
XP_006014449
LinkDB
All DBs
Position
Un
AA seq
186 aa
AA seq
DB search
MAQAVSFTVGAPPGGRPLPSLPLKQVGKTNSIIVSPRQRGNPILKFVRNVPWEFGDIVPD
YTLGQATCALFLSLRYHNLNPNYIHERLKQLGQSYALRVLLVQVDVKDPHHALKELAKIC
ILAECTLILAWSPEEAGRYLETYKSYENKPADILKERVEEDYLSRVMDCLTTVKSVNKTD
SMTLLS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggcccaggctgtgagcttcacggtgggcgctcctcctggtgggaggcctctcccatcg
ttgccactgaaacaagtgggcaaaaccaacagcatcattgtcagcccacggcagagaggc
aatcccatcctgaagtttgttcggaatgttccttgggaatttggagacattgttcctgat
tacactctgggacaggccacctgtgccctcttcctcagtttgcgataccacaatctgaac
ccaaattatattcatgagcgtttgaagcagctaggtcagtcctatgccctgagggtgttg
ttggtacaggttgatgtgaaagacccccatcacgcactaaaggagctggcaaagatctgt
atcctggcagaatgcaccctcatcctggcatggagcccggaggaggcaggcaggtacttg
gagacctacaagtcatacgagaacaaaccagctgacatcttgaaggagcgagtagaggaa
gattatttgtcaagggtaatggactgtctgaccacagtgaagtctgtgaataaaaccgac
tctatgactctgctctcc
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