Latimeria chalumnae (coelacanth): 102352627
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Entry
102352627 CDS
T02913
Symbol
NFX1
Name
(RefSeq) nuclear transcription factor, X-box binding 1
KO
K12236
transcriptional repressor NF-X1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102352627 (NFX1)
04121 Ubiquitin system [BR:
lcm04121
]
102352627 (NFX1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102352627 (NFX1)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
102352627 (NFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
DUF4202
IP_trans
ThiI_fer
Motif
Other DBs
NCBI-GeneID:
102352627
NCBI-ProteinID:
XP_006009229
Ensembl:
ENSLACG00000000769
LinkDB
All DBs
Position
Un
AA seq
1133 aa
AA seq
DB search
MAEAQPTGGVELNPEAADFIPGDGQSQPLSWRSRGRSEYNRDRNGYVPWRRQQQQQIPRG
EFQGDLLHKSNSSPRSKNHPRNVHSPTEGHGNGKSSSHSFQNQRRHRMRNDRAYPRDQSD
VAVAGHVQGGASSEWELGQDAEDWRRDAGGQNDVYSSKTEKEAANVNNRGARPKKAQFSY
RSGRGPKEREWPMAEVNTKVDLKEKRRDSVENGDPEATGGTPVFEGMEERRSNSDHKRSR
FTAKKIPRASKWNRPLSDEEHYRRQEFQHSAKNNYSSTTCPIRASDGGEECPVPEGSEEM
SSRTPAYKSSESERGYRRNYPQDRQKKPFPSERKSYWRKQIEIPKSKETHTGSLIEQLTA
EKYECMVCCEVVRVMAPVWSCQSCYHVFHLSCIKKWARSPASQAEVAEGNGGWRCPACQN
VSSRVPSLYTCFCGKMSNPEWNRNDIPHSCGELCGKKRSGQDCPHPCNILCHPGPCPACP
AFVTKACECGRTSQSVRCGQSGTIHCTNVCNNLLNCSKDNCAQVCHAGKCQPCQLVVQQA
CYCNTSSRDVPCGTDKENYDGFGYFSCQKPCKKKLNCGRHDCKEMCHAQPCQPCPQLPQL
VHSCPCGQTPLSKLLELGYNERKSCTDPIPSCGKTCGKPLPCGSHDLIHTCENLCHEGEC
GPCSRMSHISCRCGFKTKEVPCASIKSEADAVFMCDKRCNRKRSCGRHKCNEICCVDSEH
KCSLICGRKLNCGLHRCEEPCHRGNCQTCWQTSFDELTCCCGETIIYPPVPCGTRPPECK
NPCTRKHECDHPVFHNCHSEEKCPPCTYLTQKWCMGKHELRSNIPCHLLDISCGLQCNKL
LPCGMHKCKRICHKGECVTDDQCQQPCAVSRPDCGHSCMAPCHRGSPCPRTPCNAMVVLH
CNCGRRKESMICSDASSAYHRIAAIAMASKLSDMQLGDSVEISKLITKKEIKQTRLQCDE
ECAGLERNRRLAEALSIDSSSDPFNIRSSNSKYTDSLKEDARKDLKFVSEVEEEMKALVE
AVNKGKVTKRSHCYPPMNRDHRKIIHDLAEVYGIESVSYDSEPKRNIVITAVKGKSVCPN
VTLTAVLEREMLMRPPPPIPHHRQQMAKNDAGSSCVRKPLKEEPIIDYFDVQD
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcccaacctacaggtggtgtggaactcaatccagaagctgcagacttcatt
cctggagatgggcaaagtcaacctctgtcctggaggagcagggggcggtccgagtacaac
agagacagaaatggctatgtaccttggcggcggcaacagcagcagcagattcccagagga
gagttccaaggtgatttgttgcacaaatcaaactcaagtccacgttcaaaaaaccatccg
aggaatgtccactctcccactgaaggtcatgggaatggtaagagcagtagccacagcttt
cagaatcagcgtcggcacaggatgagaaacgatcgagcctatccaagggaccaatcggac
gtggctgtggcaggtcatgttcaaggtggtgcgtcatcagaatgggagttgggacaagat
gcagaggactggaggagagatgctggaggacagaatgatgtgtattcttccaagacagaa
aaagaggcagccaacgtcaacaacagaggtgcaaggccaaagaaagctcagttttcctac
agatcaggaagagggccaaaagagagagagtggccaatggctgaagttaacactaaagtg
gatcttaaagaaaaacggagagattcggtggaaaatggtgacccagaagctactggaggc
actcctgtgtttgagggaatggaggaaaggaggagtaacagtgatcacaagagatctcgc
tttacagctaagaaaattcccagggcatctaaatggaacaggcctctgtctgacgaggaa
cattatcggaggcaggagtttcagcacagtgcaaaaaacaattactcatcaacaacttgt
ccgatcagggcatctgatgggggtgaggagtgtcctgtgcctgaagggtctgaagaaatg
agcagcagaactccagcgtacaagtcaagtgaatctgaaagaggctacagaagaaattat
ccccaagacaggcaaaagaagccatttccatctgagcgtaaatcctattggaggaaacag
attgagatacccaagagcaaagaaactcatacaggatccctgattgagcagttaacagcg
gagaagtatgagtgcatggtttgctgtgaggtggtccgtgtgatggccccagtctggagc
tgtcagagctgttaccatgtctttcacctgagctgcattaagaaatgggccaggtcacca
gcctcgcaagctgaagtagcggaaggaaatggtggctggagatgtcctgcatgccagaat
gtgtcttcacgtgtccccagcttgtacacctgcttttgtggtaagatgagtaatcctgag
tggaacagaaatgacattcctcatagctgcggagagctgtgcgggaagaaacgctcaggc
caggactgtcctcatccctgtaatatcctctgccatccaggaccctgcccagcatgccct
gcatttgtaacaaaggcctgtgagtgtggaagaacaagtcagtctgttcgctgtggacag
tcgggtacaattcattgtactaatgtgtgcaacaacctgttgaactgtagcaaggataat
tgtgcccaggtgtgtcatgcaggaaagtgccaaccatgtcaactagtagtacagcaagcc
tgttactgtaacaccagctctcgggatgtaccatgtggaacagacaaggaaaattatgat
ggatttgggtatttctcctgtcagaagccttgtaaaaagaaattaaactgtgggagacat
gactgtaaggaaatgtgtcatgcccagccctgccagccctgcccccagctcccgcagctg
gtgcacagttgcccctgtggacagactcctctctccaaactgctagagctaggatacaat
gagcgcaagagctgtactgaccccataccctcatgtggcaagacctgtggcaaaccgctg
ccttgtggatcccatgatttaattcatacttgtgaaaatctttgccatgaaggggagtgc
gggccatgctctcgaatgtcacacatttcttgcagatgtggattcaaaacaaaggaagtc
ccctgtgccagcatcaaaagtgaagctgatgccgtctttatgtgtgacaaacgatgtaat
aggaaacgctcttgtggacgccataagtgtaatgaaatttgctgtgtggacagtgaacac
aaatgttcgttgatctgtgggcgcaagcttaactgcgggcttcacaggtgtgaagaaccg
tgtcaccgtggtaactgtcaaacatgttggcagacaagttttgacgaactaacctgctgc
tgtggagaaacgatcatttatccaccagttccttgtggcacaaggcccccagagtgcaaa
aacccctgcactagaaagcatgagtgtgatcatccagtgttccacaactgtcatagtgag
gagaagtgccctccatgtacatatctgactcagaagtggtgtatggggaaacatgaactg
cggagcaacataccctgccacctgttggatatctcttgtgggcttcagtgtaacaagctg
ctgccgtgtggaatgcacaagtgcaagaggatctgtcacaaaggggagtgtgtcacagat
gatcagtgtcagcagccatgtgccgtctccaggccagactgtggtcactcctgcatggct
ccatgtcatcgggggtcaccctgtcctcggacaccctgcaatgctatggtagtcttgcat
tgtaactgtggacgtagaaaagagagtatgatctgttcggatgcttccagtgcttatcac
aggatagctgcaatagccatggccagtaagctttcagacatgcagctgggagactccgta
gagatcagtaaattgattaccaagaaagagatcaaacagaccaggttacagtgtgatgaa
gagtgtgcaggattagagaggaacaggcgcctagcggaggctctcagtatagattccagt
tctgaccccttcaatattcggagcagtaactccaaatacacagatagtctgaaggaggat
gcaaggaaggatttaaagtttgtcagtgaagtggaggaggaaatgaaagcccttgtggaa
gctgtaaataagggtaaagtaacaaagagaagccactgctatccgccaatgaacagagac
catcgcaaaatcatccatgacctggcagaggtttatggcattgagagcgtgagctacgac
agtgaaccaaaacgcaacattgtgattactgcagtgaagggaaaatctgtgtgcccaaat
gtgaccctgacagctgtattagaacgagaaatgctcatgagacccccgccaccaattcct
caccacagacagcagatggcaaagaatgatgctggaagcagttgtgtgcgaaagccatta
aaagaagagccaataattgactactttgatgttcaggactga
DBGET
integrated database retrieval system
