Latimeria chalumnae (coelacanth): 102352635
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Entry
102352635 CDS
T02913
Symbol
DDX55
Name
(RefSeq) DEAD-box helicase 55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcm03009
]
102352635 (DDX55)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102352635 (DDX55)
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
Pre-60S particles
Helicases
102352635 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
SBF_like
Helicase_C_2
Cas3-like_C_2
SHOCT
Motif
Other DBs
NCBI-GeneID:
102352635
NCBI-ProteinID:
XP_005988994
Ensembl:
ENSLACG00000017050
LinkDB
All DBs
Position
Un
AA seq
596 aa
AA seq
DB search
MCGEMEEGAWESLPVKLNENVIQALKELKFTHMTPVQSATIPLFMNNKDVAAEAVTGSGK
TLAFVIPILEILLRREDKLKKMQVGAIIITPTRELAIQINEVLTHFNKHFPQFRQILLIG
GSNPIEDVEKFKEHGGNIIIATPGRLEDMFRRKADGLDLATCVKTLDVLVLDEADRLLDM
GFEASLNTILGYLPKQRRTGLFSATQTQEVENLVRAGLRNPVRITVKEKGVAASNTQKTP
ARLKNYYMICRTDEKFNQLVAFLRQHKREKHLIFFSTCACVEYYGKGLEGLVKNVKIMCI
HGKMKHKRNKIFTDFRQLESGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRT
ARIGNHGSALVFLLPMEESYVNFLSINQKCPMQEMKPLKDSVDVLPKLKSMAMCDRAVFE
KGMRAFVSFVQAYAKHECSLIFRLKDLNFASLARGFALLKMPKMPELRGKPVPDFIPEDI
DTDTIPYRDKCREKQRQKALSEPPLEKHGERKKFLKNKAWSKQKTKKERKKKLASKRSRE
EGSDMDDEDMDELLNDTRLLKKLKKGKITEEEFEKQLTGSLKKKGTVKSSHELEDD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggagagatggaggaaggcgcttgggaaagtttacctgtgaaattaaatgagaat
gttatccaggctcttaaggagctgaagttcactcacatgacacctgttcagtcggctaca
attcctttgtttatgaataacaaagatgtggctgcagaagcggtgacaggtagtggaaag
actttggcttttgttattccaatattagaaatacttctgaggcgggaggacaagttgaaa
aaaatgcaggtgggagccattattatcactccaacaagagagcttgccattcagattaat
gaggtgttgacacatttcaataaacactttccacagtttcgacaaatacttttgattgga
gggagcaatccaattgaagatgttgaaaagtttaaggaacatggaggaaatattatcatt
gctactccaggacgcttagaagacatgtttagaagaaaagcagatgggttggatttggca
acttgcgtgaaaacacttgatgtgttggtattagatgaagccgatagactattggatatg
ggatttgaagcaagtctaaacaccattctgggctatttacccaaacagaggaggactggt
ctgttttctgccactcagactcaagaggtagaaaacttggttcgagctggcctgcgtaac
cctgtccggatcacagtcaaggagaaaggagtggcggccagcaacactcagaaaacgcca
gcacgtcttaaaaattattatatgatctgcagaactgatgaaaaatttaatcagctagtg
gctttccttcgacagcataaacgggaaaaacacctgatcttcttcagtacttgtgcgtgt
gtagagtattatggaaaaggtctggaagggttagttaaaaatgtgaagataatgtgtatt
cacggaaaaatgaaacacaaaaggaacaaaattttcacagatttccgtcagctggaaagt
ggtattctggtgtgcactgatgtgatggcgagaggcatagatattccagaggtaaactgg
gttttgcagtatgatcctccaagtagtgccagtgcctttgtccatcggtgtggaaggaca
gctcgcatagggaaccatgggagtgcacttgtttttctgcttccaatggaagaatcgtat
gtcaacttcctttcaataaatcagaaatgtccaatgcaggaaatgaagcccttgaaagat
tctgttgatgttcttcccaagcttaagtcaatggccatgtgtgacagagcagtgtttgaa
aagggaatgcgagcctttgtgtcctttgtacaagcttatgcaaaacatgagtgcagcctt
attttcagactaaaagacttgaactttgcaagtctcgcccgaggctttgccttattgaaa
atgccaaagatgccggagctgagaggaaaaccagttccagactttataccagaagatata
gacacagacactatcccatatagagacaaatgcagagaaaaacagcggcagaaagcatta
tcagaaccacctctggaaaaacatggtgaaaggaagaaattcctaaagaataaagcttgg
tcgaaacaaaagacgaagaaggagagaaagaagaaactggcatcaaaacgaagtagagaa
gagggctctgacatggatgatgaggatatggatgaactcctgaatgacaccagactcttg
aaaaaactcaagaagggtaaaattactgaggaggagtttgagaaacaattgactggtagc
ctcaagaaaaagggaactgtcaagtcaagtcacgagttggaagatgactaa
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