Latimeria chalumnae (coelacanth): 102352663
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Entry
102352663 CDS
T02913
Symbol
BPTF
Name
(RefSeq) bromodomain PHD finger transcription factor
KO
K11728
nucleosome-remodeling factor subunit BPTF
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102352663 (BPTF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
102352663 (BPTF)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
102352663 (BPTF)
NuRF complex (fruit fly)
102352663 (BPTF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
DDT
PHD
WSD
PHD_5
WHIM1
Motif
Other DBs
NCBI-GeneID:
102352663
NCBI-ProteinID:
XP_014342581
Ensembl:
ENSLACG00000013815
LinkDB
All DBs
Position
Un
AA seq
3160 aa
AA seq
DB search
MRGRRGRPPKQAVVSDSAPGPVGGLRSRQRVGGRGRGAGDGEAGVIKRGYTLSPRGKRRI
GSITPSGGRGRGRASGGAGNSGRSSVRRSNNKVVYDDHESDDEEDESLHSEEDGDHDGFP
NLEEEEEEDMMEEVSDYLEEMEEDDDASYCTESSFRSHSTYSSTPGKRRQRVHRPRSPIF
EEKDVPFLELPKSSEDLLGPNENLMDVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQ
CTLMAETHIALLKAILREEDTSNTTFGPADVKDSVNSTLYFIDGMTWPEVVRVYCESDRE
YYQVLPYQETDDHPFGPIENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKL
GDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVTGVTDCVAEIQKNKPYIRHE
PIGYDRNRRKYWFLNRRIIIEEDSENAKESKVWYYSTKVQLGELIECLDKDFWERDLCRT
LEELREEIHRHMDITEDLTNKARGNNKSFLIAANEEILERLKAKQEADMEVVKKKAAEEL
ERTKKETEEDGPTDAEKCKDHVNEQSTKKDTEKTEEGLEKEKTDEPTDSGDKSSCETSKI
EVTSTHPYTGENSSTEVKNSAEGPSAASDNKNLAEDEVVAAQLPPDTAEKPPETSSSNGT
TTGILPSQSDENSSSSSIACSDQISAQNASTSKPVNDLENVEKTQSSVSSQEETGDSKVE
KTNGESSESLGGGKGTPGSTRMVTRLRNPDSKLSQLKSQQVAAAAHEANKLFKEGKEVLV
VNSHGEISRLSTRREIVMKGSLSNFFKLGQEGKYRVYHNQYSTNSFALNKHQHREDHDKR
RHLSHKFCLTPAGEFKWNGSVHGSRVLTISTLRLTIIQLENNTPAPFLHPNWASHRSNWI
KAVQMCSKPREFALALAILECTIKPVVMLPVWRESLGHTRLHRMTSIEREEKEKFKKRER
KQEEEETMQQATWVKYTFPVKHQVWKQKGEEYRVTGYGGWSWVSKTYVHRFVPRLPGNTN
VHYRTALEAPLKSGKGCLERHCEPEKRRSPAKVKTETETSCNKDRTSKESQNLQENKDQT
LACSDEKQQGKENKINEEKMDISSHSTDLDQIEEKGKTENNCENDKSIKEELMEVVEVKT
ESILKDEKPSKDDVINISEGFQLRTWYKKKVKASKLDGLLERRVKQFTLEEKQRQEKLKQ
EATVKHLGKQSGSPGKSMQESQTSTQGKIVQADLSIQNKTGLASQNKTETLIQENTQKAC
VSPRNQGHSEEPCRVLQESKEDQMQVGNQTSNSVEHNSEKQGSNHQNTDTDESKPESMTI
DNNQGQQIKMMSEDDSSKTAFVEKVSDNQESNTESNKVLVQKVCDGEPDENNSRERLEAT
FTESTNKIQICNSNKDTVDIADSQDTIMNQIFDSKSKDSADCSSENVISEKNNEEQENYL
MSQDHSESKTALDKEQILEDGARATPEAEITPNITRSQSPKSMVSDNSSEPMITEENGER
QCQKNKDDIVNQSSEIMDTGEVITDNEKGLVEGKELKEQSTAVQINGKDGNEFKQLSKVD
EHLKEQPDTELVNKIESKLNSINKITLENELTVSVKDPSLKLLTNGDTIMEEINEKDSPD
SKSFPPSPVKVDRVKDEAENIDIAPSTKVIKIKNDADGLPSMENSGLVDGTSCVPEHKSK
ENSVTGEAELMETEDMTHKQVVPSPIPSGEESSLSSDFVEQNGVQSEAKAEVINGEHKVK
TVITKVTTTTTSTVSTESKTVVKIAEVSTSQDDKSTLESSAENSAVSTMTTTTTTTVTKV
TTPTSDSKVEVVSVTEQSKTVTTTVKDSLTTAGGTSIMSMTVSKEYSTRDRVRLVKFSRP
KKTRSGTALPSYRKFVTKSNKKSIFVLPNDDLKKLARRGGIREVPGFNYNAKPALDIWPY
PSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWASLRWDDMAVKSSSGGGTTRTETSETEI
TTTEIIKRRDVGPYGIRSEYCIRKIICPIGVPETPKETPTPQRKGLRSSALRPKKPETPK
QTGPVIIETWVPEEELELWEIRGFSERVEKEKAQAVEQQAKVSEQKKAEEFKAQMEAQLK
QQRLAAQQKRLEQQKQTSTSCTAATTSTTAGTATTVSTPQKVVVGSLTGQMTPGTKVVLA
TKMGSPATVTFQQNKNFHQTFATWVKQGQSSTAASTGASTVTTITSSGQAFQITGSPVTM
AGKVITAKLPLPANSKIVTVNVPSTQGGVVQVQQKVLGIIPSSTSSSQHTFSAFQPRTAT
VTIRPNTTGAVCTSATTQQVITAGGTQIRPGVTVIRGPLQQTALGKTIIRTPLVVQQGIL
PASQTQQVVTQIIRGQPVSTAVSSSNTVTSVPSQKMLATPSSISQQVQQQATPPQTQQQM
PQAARPQQGQVKLTMAQLTQLTQGQVNIKGGSQGLTVVIQGQGQTTGQLQLIPQGVTVIP
GPGQQLMQAAMPNGTIQRFLFTPLPTVSTTTTTVAAAAAATTTAAATMTTTTTATTTTTT
AATPPPTTTTTTVIPPAPASSEPKQPPQLQQSQPQPQPVTQPPPQIQVQSPITSQTQMLP
QAIHPQPALTAVPTVQVPVQVPPQIQVQTPSQVQVQQQSQAQAPVQSQAHVQAPGPVQIQ
TSAQSQTPPQLQTQIQTLSQVTVQSPPRPQIQIQQPQAQVITVPQLQQQVQMLSQIQSHV
VAQIQAQQGIVPQQIKLQLPIQIQQASPVQAHQIQNVVTVQAASVQEQLQRIQQLREQQQ
KKKQQLLEVKKEQTLQASNQSEIIQKQVVMKQNAAIEHLKQKKTLTPAEREENQRMIVCN
QVMKYILDRIDKEEKQAAKKRKREETVEQKRNKQNATKLSALLFKHKEQLKAEILKKRAL
LDKDLQIEVQEELKKDLNKLKREKEKEKAQVAAAAAAAAAAAAATAAVATHTATATTTTT
VPTPASSHKRKREEEKESSGSKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCD
RCQNWYHGRCVGILQSEADLIDEYVCPQCQSTEDAMTVLSPLTDKDYEGLKRILRSLQAH
KMAWPFLEPVDPNDAPDYYGVIKEPMDLATMEERIQKRYYEKLTEFVADMTKIFDNCRYY
NPSDSPFYQCAEVLESFFVQKLKAFKASRSHNNKLQSTAS
NT seq
9483 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagaagaggcaggccgcccaagcaggctgtggtgtcggattctgctcctggc
ccagtcgggggattgagatcgaggcaaagggtcggcggaaggggcagaggggcaggtgat
ggtgaagcaggggtcattaagaggggctataccttgtctccaaggggcaaaaggaggatt
ggctccataacaccatcagggggcaggggaagagggagggcttctggtggtgctggaaat
agtggtagatcttcagtcaggaggagtaacaataaagtggtgtatgatgatcatgagagt
gatgatgaggaagacgagagtttgcactccgaggaagatggggaccatgatggatttccg
aacttggaggaggaggaagaagaagatatgatggaggaagtgtccgattacctggaagaa
atggaagaggacgacgatgctagctattgcacagagagcagctttaggagccacagtact
tacagtagcaccccaggaaaacgacgacaaagggtgcatcgccctcgctctccgatcttt
gaagaaaaagatgttccatttcttgaacttccgaaatcatctgaggacttattagggcct
aacgaaaacttgatggatgttattgccatctatgaggtactgaggaactttggcacagtt
ttacgcctctcccccttccgctttgaggacttctgtgctgcattggtcagtcaagaacag
tgcacgcttatggcagaaacacacattgcactgctaaaagcaattttacgagaagaagat
acttcaaatacgacttttgggcctgctgacgttaaagacagtgtaaactctacgttatat
ttcatagatggaatgacatggcctgaggtggtccgtgtttattgtgaaagtgacagggag
tactatcaagtactgccttatcaagagacagatgaccatccctttggaccaattgaaaat
aaaatcaaagtgctgcagtttttagtggatcagtttctaacgacaaacattgctcgtgaa
gagttaatgtctgaaggagtaatccaatatgatgaccattgtcgtgtgtgtcacaaactg
ggagacctgctttgttgtgaaacttgctccgctgtgtatcacttagagtgtgtaaaacca
cctttggaggaggtgccagaggatgagtggcagtgtgaggtttgcgtagcacacaaggtg
actggtgtgacagactgtgtcgctgaaattcaaaaaaacaaaccttacattcggcatgaa
cctattggatatgacagaaacagacggaaatactggttcctaaatagaagaattattata
gaggaggattcagaaaatgcaaaggaaagcaaagtctggtactacagcactaaggttcag
ctgggagaactgattgaatgcttagacaaggatttctgggaaagggatctttgtaggacg
ctcgaagaactacgggaagaaattcatcggcacatggatattacagaggacttgacaaat
aaagctcggggaaacaataaatctttccttattgcagcgaatgaagaaatcttggaacga
ttaaaggcaaaacaagaggctgacatggaagtagttaagaaaaaggcagctgaagaactg
gaaaggaccaaaaaagaaacggaggaggatggtccaactgatgctgagaaatgtaaggac
catgtaaacgagcaatcgacaaaaaaggacacggaaaaaactgaggagggattggagaag
gaaaaaacagatgagccaacagacagtggggataaaagtagctgtgagacatcgaagatt
gaagttaccagcacacatccctacacaggagaaaatagttccacagaggtgaagaactcc
gcagagggtccatcagcagcctctgataacaagaacctggcagaagatgaggtggtggca
gcacaacttcccccggatacagccgaaaagcctccagagaccagctcaagcaatggaact
actacaggcattttaccttctcagtctgatgaaaatagcagcagtagcagcattgcctgt
tcagatcagatttctgctcagaatgcgtcaaccagcaagccagtcaatgatctagagaat
gtagaaaaaactcagtcttcagtcagtagtcaagaagaaacaggtgattccaaagtggag
aaaacgaatggtgagagtagtgaatccttgggaggaggaaaaggcacccctggctcaaca
agaatggtaacgaggttgagaaatccagacagcaaactgagtcagctaaagagccaacag
gtagctgctgcagctcatgaagcaaataaactgttcaaagaaggaaaggaggtcctcgtg
gtaaactcccatggagaaatctctcgcttgagtaccagaagagaaatagtaatgaaggga
agcttaagtaatttctttaagcttggccaggaaggaaaatatcgagtgtaccacaaccag
tatagcacaaactcatttgcactgaacaagcaccagcacagggaagaccatgacaagaga
cgacacctttcacacaagttctgtttgacacctgctggagaattcaaatggaatggctca
gtacatggatcaagggttctgactatttccactttgagattgaccatcattcaactagag
aataatactcctgcaccattccttcatcccaattgggcttcccacagatctaactggatt
aaagcagtccagatgtgtagcaagccaagagaatttgcactagcattggctatactggag
tgtacaattaagcctgtagtcatgctgccagtgtggcgggaatcccttgggcatactagg
ttgcataggatgacatctattgaaagagaagagaaggaaaagtttaaaaaaagagagcgt
aagcaggaggaggaagaaactatgcagcaagcaacttgggtgaagtacacttttcctgta
aaacatcaggtttggaaacagaaaggggaagaatacagggtgacagggtatggaggatgg
agttgggttagtaaaacatatgttcatcgatttgttccccggttaccaggaaataccaat
gttcactatagaacagcactggaagctcctttaaaaagcggcaaaggctgtctagaaaga
cattgtgaaccagaaaaaagaagaagtccagctaaagtaaaaacagagactgaaaccagt
tgtaacaaagacaggacatcgaaagaatcccagaatttacaagagaataaagaccaaact
ttagcatgttcagatgaaaaacaacaaggaaaagagaacaaaatcaatgaagaaaaaatg
gatatcagttcacattctacagatttagatcaaattgaagaaaaagggaaaacagaaaat
aactgtgaaaatgataaatctattaaagaagaattaatggaagtagttgaagtgaaaact
gaatcaattttaaaagatgaaaaaccttctaaagacgatgtaatcaatattagtgaaggg
tttcagctacggacttggtacaaaaagaaagtaaaagcatcaaagttagatgggctactt
gagaggagggtaaaacagtttacattggaagaaaaacagagacaagaaaagttgaagcag
gaagctactgtaaaacatttaggaaagcagtctgggagcccaggaaaaagtatgcaagaa
tcacagacgtcaactcagggaaaaatagttcaggctgatttatctatccaaaataagact
ggactagcaagtcaaaacaaaactgaaaccttaattcaagaaaacacacagaaagcatgt
gtgtcccccaggaaccagggtcattctgaggagccctgcagggttctgcaggagagtaaa
gaggaccaaatgcaagttggaaatcaaacctctaactctgttgagcacaattcagaaaag
caaggttctaatcatcaaaacactgatacagatgaaagtaagcctgaatcaatgaccata
gacaataatcagggacaacaaattaaaatgatgagtgaagatgattctagtaaaactgcc
tttgttgaaaaagtatcagataatcaggaatcaaatactgaaagtaataaagttcttgtg
cagaaagtgtgtgatggtgaacctgatgaaaataattcaagagagaggttagaggctaca
ttcactgaaagcacaaataaaattcagatttgtaactccaacaaagatacagttgatatc
gctgattctcaagataccattatgaaccagatctttgactccaaaagcaaagattcagca
gactgtagttctgagaatgttatctctgaaaaaaataatgaagaacaagaaaattatctg
atgagccaagatcattctgaaagcaagactgcattagacaaagaacagattcttgaagat
ggggcacgagcgacacctgaagcagagattactccaaacataactagaagtcaaagccct
aaaagcatggtcagtgataactcatcagaaccaatgatcactgaagaaaatggtgaaaga
cagtgtcagaaaaataaagatgatattgtaaatcagagttcagaaataatggatacaggg
gaggttattactgataatgaaaagggactcgttgaaggcaaggaattaaaggagcaatcg
actgcagttcagataaatggcaaagatggtaatgagttcaaacaactatccaaagttgat
gaacacttaaaagaacaacccgataccgaacttgtgaataaaattgagtcaaaactaaat
agtattaataaaattacgttggaaaatgaattgacagtgtcagtgaaagatccatcatta
aaactgctcacaaatggtgataccattatggaggaaattaatgaaaaagatagcccagat
tctaaatcatttccaccaagtcctgtaaaagttgacagggttaaagatgaggctgaaaat
atcgacatagcgccatcaacaaaagtgatcaaaataaaaaatgatgctgatggtcttcct
tctatggagaattctggccttgttgatggaacctcgtgtgtgcctgagcacaaaagtaaa
gaaaatagtgttactggtgaagcagagcttatggaaacagaagacatgactcacaaacaa
gttgttccttcacctataccatcaggcgaggagtctagcttgagtagtgactttgttgag
caaaatggcgttcagtctgaagccaaagctgaagttattaatggagaacacaaagtaaaa
actgttattaccaaggtgactacaaccacaacttcaactgtttctacagaatcaaaaact
gttgttaaaatagcagaggtctcaacatctcaagatgataaatcaacactagagtcttca
gcagaaaattccgctgtttctaccatgaccactacaacaacaacaacggtaactaaagtt
actacccccacttcagacagtaaagtagaagttgtctcagtaactgaacaaagtaaaact
gttacaactaccgttaaggactctctgacaacagctggaggaacatcaattatgtctatg
acagttagtaaggagtattccacacgagacagagtaaggctggtgaaattttcaaggcct
aaaaagactcgttctgggacagctctaccttcttacagaaaatttgttaccaaaagtaat
aaaaagagcatatttgttttgcccaatgatgacttaaaaaaattggctaggcgtggcggg
atcagagaggttcctgggtttaactacaatgcaaagccagctttggatatatggccttat
ccttcaccaagaccaacttttggtataacatggaggtatcgactgcagacagtgaagtcc
ttggcaggtgtgagtcttatgttacggttattgtgggcaagtttaagatgggatgacatg
gcagttaaatcctcatctggtggaggcactacacgcacagaaacctcggaaactgaaatt
acaacaactgaaataatcaagcggcgtgatgttggaccatatggaatcaggtctgagtac
tgtataagaaaaatcatttgcccaattggtgttccagaaactccaaaagaaactcccacg
ccacaacgtaaagggcttagatcaagcgctttgaggccaaagaaacctgaaacacctaag
cagaccggacctgtcataatagagacttgggtgcctgaagaggaactggagttatgggaa
attaggggattttctgaaagggtggagaaagagaaagcacaggctgttgagcagcaggct
aaggttagtgagcagaagaaagccgaggagttcaaggcccaaatggaggctcagctaaaa
cagcaacgattggctgcccagcagaaacgattagaacaacagaagcaaacatctacgtct
tgtacagctgccactacttctaccactgccggtactgccacaactgtttcgacgccccag
aaagtagtagtaggttccttgacaggtcagatgaccccaggaaccaaagttgtacttgcc
actaagatgggctctccagcaacagtaacattccagcaaaacaagaacttccatcagacc
tttgctacttgggtcaaacaaggccagtcaagtacagccgccagcacaggtgcctcaaca
gttacaactataaccagcagcggtcaggcgttccagatcacaggcagccctgtaacaatg
gcaggtaaagtgataactgcaaaactgccacttcctgccaacagcaaaatagtcactgtc
aatgtgccatcaacccaaggaggtgtagttcaagtccaacagaaggtccttggaatcatt
ccttccagcacaagtagcagtcagcacaccttttctgcattccagcctcgaacagctact
gtaactatcaggccaaataccacaggagctgtgtgtacttcagccacaacccagcaggtg
ataactgcaggcgggactcagattcgtccaggagtgacagtgataagaggacctctccaa
cagacagctctgggaaaaaccataatccggacaccattagtggtacaacaaggtattctt
ccagccagtcaaactcaacaggtggttactcagatcatcagaggtcaacctgtatcaact
gcagtttccagttctaatactgtgacttcggttcctagtcagaagatgctagcaacccca
agctcaatctcacagcaggtccagcaacaagctacaccaccacaaacgcagcagcaaatg
cctcaggctgctcgtccacagcagggacaagtcaaactaacaatggcacagctcacccag
ctaactcaaggacaggtaaacataaaaggtggcagtcagggcttgactgttgttatacag
ggacaggggcaaacaactggtcagttacagctgattcctcagggagtaactgtcatccca
ggccctggccagcagttaatgcaggctgccatgccaaacggtaccattcagaggttcctt
tttaccccgctacctacggtatcaaccacaacaaccactgtagcagcagcagcagcagcg
acgacaacagcagcagcaacaatgactactactactactgctactactacgactactact
gctgctacaccaccaccaacaacaactactactactgtaataccaccagcaccagcttca
tcagaacccaaacagccaccacagctgcagcagtcccagccacagccccaacctgtaaca
caacccccaccccagatacaagttcagtctccaattacgtctcaaacacaaatgttaccg
caggcaattcacccacaaccagctctaacagcagtacctacagtgcaggtcccagtccag
gtgccacctcaaatccaggtccaaactccttctcaagtgcaggtccagcagcagtcacag
gcccaggccccagtacagtcacaggcccatgtccaggccccgggtcccgtacagatccag
acttcagcccaatcccaaaccccgccccagctccagacccaaattcaaaccctcagtcag
gttacagtgcagtccccgccacgtccgcagattcagatccaacagcctcaggctcaggtt
atcacggtcccacagcttcagcagcaagtgcaaatgttatcacaaatccagtcgcacgtt
gttgctcagatacaggcacagcaagggattgtgccacagcagattaagcttcagttgcct
attcagatacaacaagccagcccagtacaggcccatcagatccaaaatgtggtgacggtg
caagctgccagcgtccaggagcaactccagcgaatccagcagctccgagaacagcagcag
aaaaaaaagcagcagctgttggaggttaagaaggagcaaaccctacaggcatctaatcag
agtgaaattatccagaaacaggtggtaatgaagcaaaatgctgcaatagaacacctgaaa
cagaagaagaccttgacacctgctgaacgagaagaaaaccagagaatgattgtgtgcaat
caggtaatgaagtacattctggacagaattgataaggaggagaaacaagcagcaaagaaa
agaaagagggaagagacagtggagcagaaacgcaataagcagaatgcaacaaaactttca
gctttactctttaaacataaagagcagctgaaggctgagatactgaaaaagagagcgtta
ttagacaaggacctacaaatagaagtgcaggaggaactcaagaaagacctcaataaactg
aaaagggagaaggaaaaggaaaaagcacaggtggcggcagctgcggctgcagctgctgct
gcggcggcagctacggctgcagtggcaacacacacagccacagccacaaccaccacaaca
gtaccgacaccagcgtcctcccataaacgaaaacgggaagaggagaaagagtcttctggt
tccaaatccaagaagaaaaaaatgatttcaactacctcaaaggaaaccaagaaggacaca
aagctttattgcatctgcaagacgccttatgatgaatctaaattctacattggctgtgat
cgttgtcagaactggtaccacgggcggtgtgttggtattttgcagagtgaggcagacctc
attgatgagtatgtctgtcctcagtgccagtcaacagaagatgccatgacagtcctaagc
ccattaacagacaaggactatgaaggtttaaaaagaatactccgttctttacaggcacac
aagatggcttggccattcctggaaccagtagatcccaatgatgcgccagattattatgga
gttattaaagaaccaatggatcttgctaccatggaagagaggatacagaaacgttactat
gagaaactgacagagtttgtagcagatatgaccaaaatcttcgacaactgccgttactac
aatcccagcgattctcccttctatcagtgtgcagaagttcttgaatcattctttgtacaa
aagttgaaagctttcaaggcaagcaggtctcataacaacaaactgcagtctacagcttct
tag
DBGET
integrated database retrieval system
