Latimeria chalumnae (coelacanth): 102352944
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Entry
102352944 CDS
T02913
Symbol
TRUB1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcm03016
]
102352944 (TRUB1)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
102352944 (TRUB1)
Transfer RNA biogenesis [BR:
lcm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102352944 (TRUB1)
Prokaryotic type
102352944 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
102352944
NCBI-ProteinID:
XP_005995377
Ensembl:
ENSLACG00000014885
UniProt:
H3B4S8
LinkDB
All DBs
Position
Un
AA seq
298 aa
AA seq
DB search
MASNIAGTSMTSTATKLQSLSGLFAIYKPKGPTSADVLNKLKEKLMEEADMKPLSRKRKK
QTLKVGHGGTLDSAASGVLVVGIGRGTKMLGSMLSGSKKYTAVGELGKATDTLDAIGTVT
EEKPYGHITKDDLEGILWKFTGDTMQVPPLYSALKKDGQRLSCLVKKGEAVEAKPARPVT
VYSLSLQEFKPPLFTLNVECGGGFYVRSLVSDIGKELSTCAHVKELTRTKQGPFTLDEHI
LHEEKWTVDEIAQAIEHSMHLLPSEPAVKKLKTESQQDMIEKKAPNSEDKTHQKTDNN
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacattgctgggaccagtatgacaagtacagctacaaaactgcagtctttg
agtgggttgtttgctatttataagcccaaaggtccaacctcagctgatgtgctgaacaaa
ctcaaagagaaactaatggaagaagctgatatgaagccgctatcaagaaagagaaagaag
cagacattaaaagttgggcatgggggaacactggatagtgcagcatcgggagttttggtg
gttggtattggacgtggcaccaagatgttgggtagtatgttgtctggatctaagaaatac
acagcagttggagaactgggaaaagccactgacaccctagatgctataggaacagtaaca
gaagagaagccatatggccacataacaaaggatgatttagaagggattctatggaaattc
actggagacacaatgcaagtacccccattatactcagctttgaagaaagatgggcagagg
ctttcatgcttggtgaagaaaggggaggctgtggaagcaaagccagcaagaccggttaca
gtttacagtctctctcttcaagagttcaagcctccactctttactctcaatgttgagtgt
ggaggtggcttttatgtcagaagcttggtcagtgatattggcaaagaactatctacttgt
gcccatgtgaaggagttaaccaggaccaaacagggtccttttacactggatgagcatata
cttcatgaagagaaatggacagttgatgaaattgcacaagctatagagcacagcatgcac
cttctcccatctgagcctgctgtcaaaaaattaaagaccgagtcacaacaggacatgatt
gagaaaaaggctcccaacagtgaagataagactcatcagaagacagacaataattaa
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