Latimeria chalumnae (coelacanth): 102353003
Help
Entry
102353003 CDS
T02913
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102353003
Membrane trafficking [BR:
lcm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102353003
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
102353003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
Lgl_C
Beta-prop_RIG_2nd
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
102353003
NCBI-ProteinID:
XP_006012639
Ensembl:
ENSLACG00000000400
LinkDB
All DBs
Position
Un
AA seq
936 aa
AA seq
DB search
AIHSVGWHHEGKQFMCSHSDGSLTLWNLKNPSRPFQITVPHGKIQRDGRKLESCKPILKV
EYKTCKNSEPFIIFSGGLSYDKASRRPSLTIMHGKSITVLEMDYAIVDFLTLCETPYPNE
FQEPYAVVVLLEKDLIVVDLTQGSFPIFENPYPMDIHESPVTCTAYFAECPPDLIPVLYS
VGAKHKKQGYSNKEWPISGGTWNLGTQTYPEIIITGHADGSIKFWDASAITLQMLYKLKT
SKVFEKQKVGEGKQSAEIVEEDPFAIQMVYWCPESRIFCVAGVSAQVIMYRFSKHEVTTE
IVSLEVRLQYEVEDILTPEPEPVPPFPEPSSQTTSLKNQNLSGSVGTVASDGVKDSIPCL
KVKSRPVRMPPGYQAELVVQLVWVDGEPPQQITSLAVCSAYGLITFGNCNGLAVVDFIQK
TVLLSMGTIDLYGSSDPYQRQPRSPRKSKQFTADNFCMRGLSNFYSDSKKRIRTSYQSLT
ELTDSPVSLELERCKSPTSDHVNGHCTSPTSQPCSTGRRPPGSESSKGNRRGSGKPPFRK
AQSAACMEISLPVTTEESRENSFSRSRSSSVASIDKETKEAITALYFMESFARKTDQTIS
PCLWVGTSLGMVLVISLNLPSAEEQRQTEPVMVSPSGTVLTLKGAVLSFSSLDCTGGLIH
PPYEVWRDPNSMDDGEKTRKRKLITFSPSSSQEMGDHQFAVICSEKQAKVFSLPSQTCLY
VHNITETSFVLRADVVTMCNSICLACFCANGHIMTMSLPSLRPMQDVNYLPLTDMRIART
FCFTNGGQALYLSSPTEIQRITYSQEMCDNLQEMLADLFTPVETPEAQARGFLKGLFGGS
GQTFDREELFGEAAAGKASRSLAQHIPGPGGIEGVKGAAGGVMGDLARARIALDERGQRL
GELEERTAGMMASAEAFSKHAHELMLKCKDKKWYQF
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
gctattcattctgtagggtggcaccatgaagggaagcagttcatgtgcagccattcggat
ggcagtctgaccctgtggaacttgaagaatcccagcaggcctttccaaatcacagtacca
catgggaagatccagcgagatggaaggaaacttgagtcttgtaagccgatcctgaaagta
gaatacaaaacatgtaaaaatagtgaaccatttataatcttctccggtggactttcctat
gataaagcaagcaggagacccagcctcaccattatgcatggcaaatcaatcacggtactg
gagatggactatgccattgtcgactttctgactctctgtgaaacaccatacccaaatgaa
tttcaggaaccttatgctgtggttgttctgttggagaaagacttaattgttgtagatctt
acacaaggcagttttccaatctttgaaaatccttatcccatggatatccacgagtctcca
gtaacctgcacagcgtattttgctgaatgccctccggatctgattcctgtgctttattcc
gtgggagctaaacacaaaaagcaaggatatagcaataaggaatggccaatcagtggaggg
acctggaacctaggaacacagacatatcctgaaattattattacagggcatgcagatgga
tcaataaaattctgggatgcttctgccataaccctgcagatgttatacaagctaaaaacc
tccaaggtgtttgagaaacagaaagtcggagaggggaagcaaagtgccgagattgtggag
gaggacccctttgccatccagatggtgtattggtgtccagagagtaggatcttctgtgtg
gctggtgtctcagctcaagttatcatgtacaggttcagcaagcatgaagtcacaactgaa
atagtgtctttagaggtgcggttgcagtatgaggttgaagatatccttacaccagaacct
gagccagtccctccattccctgaaccttcctcccagacaacctccttaaagaaccagaac
ctgtctggaagtgttggcactgtggcatctgatggtgtgaaggacagtatcccctgtctc
aaggtgaaatctcgtcctgtgaggatgcctcctgggtaccaggcagaactcgttgtccag
ttggtgtgggtggatggagagcctcctcagcaaatcaccagccttgcagtctgctcagcc
tatggactaataacatttggaaattgcaatggcctggcagtggttgattttatccagaag
actgtcctcctcagtatggggacaattgacttgtatggctccagcgacccgtatcagcgg
cagccccgctcgccacgcaagagcaagcagttcaccgcagacaacttttgcatgcgtggc
ctgtctaacttttattcagattcaaagaaaaggatccgtacttcctaccaaagtttgacc
gagctgacagatagtcctgtgtccctggaactagagcgctgcaagtccccaacttcagat
cacgtgaatgggcactgcacgagtccaacctcacagccctgcagcactgggaggcgccct
ccaggctctgagagctccaagggtaacaggcgtggttctggaaagcctccattccgaaaa
gcacagtctgctgcttgcatggagatctcactccctgttactactgaagaaagtcgggaa
aactccttcagccgttcccggagttccagtgttgccagcattgacaaagagacaaaggaa
gccatcacagccctgtactttatggagtcttttgcccgtaagacagatcagacaatctct
ccatgcttgtgggttggcaccagtctgggcatggtgttggtcatctctctcaatctccct
tcagctgaggagcagaggcaaacggaacctgtcatggtgtctcccagtggtacagtgttg
acattaaagggggcggtgctaagtttttccagtctggactgcacgggggggttgatacac
cctccctacgaggtctggcgagacccaaacagcatggacgatggtgaaaaaactcgcaaa
aggaagctaatcacgttctcaccgtcctcctcccaggagatgggggaccatcagtttgcc
gtgatctgctcggagaaacaagccaaagtgttctcactgccttcccagacttgcctttat
gtgcacaacatcacagagacctcgtttgtgttacgggcagatgtggtgaccatgtgcaac
agcatctgtctggcctgcttctgtgccaacggacacatcatgactatgagtttgcccagc
cttcggccaatgcaggatgtgaactacctgcctctaacagatatgaggatagcaagaact
ttctgtttcaccaatggagggcaggccctgtacctgagctcacctacagagatccagcgt
ataacctacagtcaagagatgtgtgacaatctacaggagatgctggcagatctgtttaca
ccagtggagacgccagaagcccaagccagaggcttcctaaaggggctctttggaggtagc
gggcagaccttcgacagagaagagctctttggtgaggcagcagcagggaaagcatcacgg
agcttggcacagcacatcccaggaccagggggcattgagggagtaaaaggggcagcagga
ggagtgatgggagacttagctagagcacggattgccctggatgagagggggcagagactg
ggggagctggaagaacggacagctggcatgatggcaagtgcagaggccttttctaaacac
gcacatgagctgatgttaaaatgcaaagacaaaaaatggtaccagttctaa
DBGET
integrated database retrieval system