Latimeria chalumnae (coelacanth): 102353107
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Entry
102353107 CDS
T02913
Symbol
RC3H1
Name
(RefSeq) ring finger and CCCH-type domains 1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102353107 (RC3H1)
04121 Ubiquitin system [BR:
lcm04121
]
102353107 (RC3H1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102353107 (RC3H1)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102353107 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
zf-CCCH_4
FYVE
Baculo_IE-1
Vesi_VP2
PaaA_PaaC
zf-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
102353107
NCBI-ProteinID:
XP_014342758
Ensembl:
ENSLACG00000016186
LinkDB
All DBs
Position
Un
AA seq
1109 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IDLLPVNSALLQLVGAQVPDQQPLALGSGVEDTQHYEEARKCVEELALYLKPLSSARGVG
LNSTSQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWKQLEDGLVAVKTVVHGLVDFIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLAVHRPLSKSLTQLTEVGLPPAPGLLPE
ETIDLGSRKPPTLPNGIVSTGAQLISRGTDSGFESTLKPGKMEHVSISAPGSPPDSQNVI
KNSRPALPVSHLQSDIAPLPASKPVPIYPSPQPDVFYPDPRSTGPPYEPGPYPQGMYYTH
PSSQYLQHHYVRTQANVPEPGLPCQDHYGPYVQDRIVSSQYPAPPPQQYPPMGQPMYPSP
YDSRRVYPPAQSYQREEMVRGSPAPGDMPPTTVSPYMPESRERYPQVDSYYPVNPHPGQI
RPSYHREPYGRLPPHQPSLDDLHRRRKEIMAQLEERKVISPPPFAPSPTLPHSFHAEEQY
PDEDFKAASKYKGNDYTGQFSPWSCDTIGSYICAKEPKSKDAMGSGSMDMTNMDNKGLRD
QFLDLQRRATETSDDDLIPFGDIPTVSRFGAISRNPKTGYQTPGPVQAMASQGATTKHIN
YSSYGVHGGWGGSAYTSHQNLPSQGHFTDRERLSMPDMAPHGKHSGHHSSSDREHLKMEL
QQLNQQISQHTQLRGLERETSSLAGQLPPKWPGMMSSEQLNLELHQVEREIGKRTRELNL
ESPASLDLPYKLGSSKQAENGQPEPKCKVSSEDLQLQLSDMSNGSSLVQDSGISSLTSKT
AALNLSADPDSLGVSGDPQKNGTTPTSLP
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcgtgcccgatttgcacgcagacc
tttgacgagacgatccgcaagcccatcagcctgggctgcggccacactgtctgcaagatg
tgcctgaacaaactgcaccggaaggcgtgccccttcgaccagaccactatcaacaccgac
atagacctcctgcccgtcaactcggcactgcttcagctagtgggtgcccaggttccagat
cagcagccacttgccctgggctctggagtggaagacacgcagcactatgaggaggcgagg
aagtgtgtggaggagctggccttgtacctcaagccactcagcagtgccaggggtgttggg
ttgaacagcacctcccagagcgtgctgagccgtcctatgcagagaaagctggtgaccctg
gtgcactgtcagttggtggaggaggagggccgaatacgggccatgcgggcagcccgctca
ctaggagaacgcaccgtcacagagctcatcctccagcatcagaatccccagcagctctct
tccaacctgtgggccgctgtccgagccagggggtgccagttcctgggaccagctatgcaa
gaggaagcactgaagctggttctgcttgccctggaagacggttcagcattatcccgaaag
gttctggttctgtttgtggttcagaggttagagccgcgattccctcaggcctccaaaacc
agcattggccatgttgtgcagctcctctatagagcttcctgttttaaggttaccaaacgt
gatgaggactcgtcactgatgcagctgaaggaagagtttcgcacctacgaggcattgcgc
cgtgaacacgactcccagatcgtacagatcgccatggaggcaggacttcgcatcgcacct
gaccagtggtcttcacttctgtatggagaccagtctcacaaatctcatatgcaatccatt
attgacaagctacagactccagcgtcctttgcacaaagcgtccaggaactcactattgcc
cttcagaggacaggagacccagcaaacctcaaccggctccgaccacaccttgaactgttg
gctaatattgaccccagtccagatgcccctccgccgacatggaagcagctggaagatggg
ctggtggctgtgaagacggtggtacatgggctggtggacttcatccagaaccacagtaaa
aaaggcgccgatcagcagcagcctcctcagcacagcaagtacaaaacttacatgtgtcgg
gacatgaagcagcgaggggggtgcccacgtggagccagctgtacctttgcacactctcag
gaggagttagaaaaatttcggaagatgaacaagcgcttggcagtccatcggccactcagc
aagtccctgacccagcttacagaggtaggcttgccaccagcacccggacttctaccagaa
gagaccattgacctgggcagccgcaaaccacctacgctgcctaatggaatcgtatcgaca
ggagctcagctgatctcgcgtgggacagactctgggtttgagagcactttgaaacccggg
aagatggagcatgtgagcatcagtgcgccgggatcaccgcctgactcgcaaaatgtaatc
aagaattcacgtcctgcattaccggtcagccatttgcagtcagacatagcccctctccca
gcctccaaacctgtgccgatctatccctcaccacagcctgatgtgttttatccggacccc
cgaagcacgggcccaccctatgagccagggccatacccccaaggtatgtattacactcac
ccatcctcccagtacctgcaacatcactacgttcggacgcaagcaaatgtacctgaacca
ggtcttccctgtcaggaccactatggaccctacgtgcaggatcgaattgtgagttcccag
tatcccgccccaccaccccagcagtatcctccaatgggccagcccatgtacccatctccg
tacgacagccgccgcgtctatcctcccgcacagtcctaccagcgagaagagatggtccga
gggagcccagcccctggtgacatgccgccaactactgtgtcgccttacatgccagagtca
cgggagcgctacccccaagtggacagctactatcctgtaaacccgcatcctggtcagatc
aggccttcataccacagggagccctatggtcggctgcccccacatcagcccagcctggat
gacctgcaccggcggcggaaggagatcatggcacagctagaggagaggaaggtcatctcg
cctcctccctttgcaccctcaccaacactgccacattcattccatgctgaagagcaatac
ccggacgaggatttcaaagctgccagcaagtacaaaggaaacgattatactggccagttc
tcaccctggtcctgcgacaccatcggctcctatatctgcgccaaagaacccaaatccaaa
gatgccatgggctcggggagcatggacatgacgaatatggacaataaaggcctgcgagac
cagttcctggatctgcagaggagagcaactgagaccagtgatgatgaccttattcccttc
ggtgacatacccactgtctcccgattcggagccatctcccgcaaccccaaaaccggatac
cagacacctggccccgtgcaggccatggcatctcaaggagccaccaccaagcatatcaat
tacagttcgtatggcgtccatggaggctggggaggttctgcatacacatctcaccaaaac
ttgccttctcagggacatttcactgacagagagaggttatccatgcctgacatggccccc
catgggaaacatagtggacatcactcctcatcagatagagagcatctgaagatggaacta
cagcagctgaaccagcagattagccagcatacacagctacgaggactggagagggagacg
tcttccttggcaggccagctgcccccgaaatggccagggatgatgtcgagcgagcagctg
aatttggagcttcaccaggtggagagggagatcggcaagagaacacgggagctgaattta
gaaagtcccgcttcactagacctgccatataaactgggatccagtaaacaggcagagaac
ggacagcctgaaccgaagtgtaaggtctcttctgaggacctccagctacagcttagtgac
atgtccaacgggtcaagcctggtccaggatagtggcatcagctccctgacaagcaagaca
gctgctctgaacctgtcagcggaccctgactccttgggggttagtggcgatccccagaag
aatgggacgacccccacctcacttccgtga
DBGET
integrated database retrieval system
