Latimeria chalumnae (coelacanth): 102353118
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Entry
102353118 CDS
T02913
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00260
Glycine, serine and threonine metabolism
lcm00630
Glyoxylate and dicarboxylate metabolism
lcm00670
One carbon pool by folate
lcm01100
Metabolic pathways
lcm01200
Carbon metabolism
lcm01230
Biosynthesis of amino acids
lcm01240
Biosynthesis of cofactors
lcm04981
Folate transport and metabolism
Module
lcm_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102353118 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102353118 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102353118 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
102353118 (SHMT1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102353118 (SHMT1)
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Paralog
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
SHCBP_N
Motif
Other DBs
NCBI-GeneID:
102353118
NCBI-ProteinID:
XP_005997518
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All DBs
Position
Un
AA seq
486 aa
AA seq
DB search
MADVPLVNGDHKDAALWVSHNKMVLEPLSTNDPEVYSIVKKEKNRQKFGLELIASENFAS
RAVLEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALEVYGLNPEQWGVNVQPY
SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPKT
GYIDYDRLEENARLFHPRLIIAGVSCYSRNLDYARMRKIADENGAYLMADMAHISGLVAA
GVVPSPFEHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETMYNLEGLINQAVFP
GLQGGPHNHAIAGVAVALKQALTPEFKLYQCQVVVNCKALATAMIELGYNIVTGGSDNHL
ILVNLQNKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLMEKDF
RKVAQFIHRGIDLTLEIQNDMNPKALLREFKEKLVQDAKYQPKIKQIREEVEAFAANFPI
PGLPEL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtgcctcttgtgaacggagatcataaagatgcagcactctgggtatcccat
aataagatggtactggagccactgagtaccaatgatccagaggtttacagtattgttaag
aaggagaagaataggcagaagtttggtttagagctgattgcttctgagaactttgcaagc
cgagcagttctagaggcactgggttcctgtatgaataataagtactctgaaggatatcca
ggacaaaggtactatggtggaacagagtttgtggatgagctggagagactttgtcagaag
agagctctggaggtgtatggtctgaatccagagcaatggggagtcaatgtgcagccttat
tccggttcccctgctaactttgcagtgtatactgcccttgtggagccacatgggagaatc
atgggattagatcttccagatggtggtcacctgactcatggattcatgacagaaaaaaag
aaaatctctgctacatctatttttttcgagtccatgccttacaaggtgaaccctaaaact
ggttatattgattatgaccgactggaggaaaatgcccgcctcttccatccaaggctcatt
attgcaggtgttagctgctactctcgtaaccttgactacgccagaatgcggaagatagca
gatgaaaatggagcctacctgatggctgacatggcccatatcagcggcctggtggcggca
ggggttgttccctctccctttgagcattgtgatattgtttcgactacaacccataaaact
ctgagaggctgcagggctggaatgatcttctatcggaaaggaactcgcagtgtggatccc
aagacaggaaaagagactatgtataaccttgaagggctaatcaatcaagctgtctttcca
gggttgcagggtgggcctcacaaccatgcgattgcaggtgtggctgtggctctgaagcaa
gctctgaccccagagttcaagttatatcagtgccaggtggtggtaaattgcaaggcattg
gctacagccatgatagagctgggctacaacatcgtcactggtggctcagataaccatttg
atcttagtgaatctgcaaaataaaggaactgatggtgggagagcagagaaggtgctagaa
gcctgttccattgcctgcaacaagaacacctgtccaggagataagagtgccttacgtccc
agtggtttaagacttggcactccagcccttacatccagaggactgatggagaaagacttt
agaaaggttgcacagttcattcatagaggtatcgacctaaccttagagatccagaatgac
atgaatcccaaagcgctactgagggagttcaaagaaaagctggtgcaagatgcaaagtac
caaccaaagatcaaacagatcagagaggaggtggaagcctttgctgccaactttccaatc
cctggactgcctgagttgtaa
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