Latimeria chalumnae (coelacanth): 102353141
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Entry
102353141 CDS
T02913
Symbol
EIF4A3
Name
(RefSeq) eukaryotic translation initiation factor 4A3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03013
Nucleocytoplasmic transport
lcm03015
mRNA surveillance pathway
lcm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102353141 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
102353141 (EIF4A3)
03015 mRNA surveillance pathway
102353141 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102353141 (EIF4A3)
03041 Spliceosome [BR:
lcm03041
]
102353141 (EIF4A3)
03009 Ribosome biogenesis [BR:
lcm03009
]
102353141 (EIF4A3)
03012 Translation factors [BR:
lcm03012
]
102353141 (EIF4A3)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102353141 (EIF4A3)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102353141 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
102353141 (EIF4A3)
Spliceosome [BR:
lcm03041
]
Complex C
Other components
EJC/TREX
102353141 (EIF4A3)
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
90S particles
Helicases
102353141 (EIF4A3)
Translation factors [BR:
lcm03012
]
Eukaryotic type
Initiation factors
eIF-4
102353141 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
102353141
NCBI-ProteinID:
XP_006003703
Ensembl:
ENSLACG00000000108
UniProt:
H2ZRV2
LinkDB
All DBs
Position
Un
AA seq
406 aa
AA seq
DB search
MASGLTSVKKRILKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRSIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggggctaacctcggtgaagaagcgtatcctgaaggaggaagatatgaccaaa
gtggagttcgagacgagcgaggaggtggacgtgacgccaacgttcgacaccatggggttg
cgggaggacttgctccgcggcatctatgcctacggttttgaaaaaccgtcagctatccag
cagagagccattaaacagatcattaaaggcagagatgtgattgcacagtcccagtctggt
acaggaaaaacggcaactttttgtgtgtcagtgttacagtgtttggacattcaggttcga
gaaacccaagctttgatcttggcaccaaccagagaattggcagggcagattcagaaggtt
ctgctagcccttggtgactatatgaatgttcagtgccatgcctgcattggagggacaaat
gttggagaagatatcagaaagctggattatgggcagcatgtagtctctggcactcctggg
cgtgtatttgatatgatccgcaggaggagtttaaggacgcgttccataaagatgttagtc
cttgatgaagccgatgaaatgcttaataaaggcttcaaggagcagatttatgatgtttac
aggtatctgccgcctgccacacaggtggttctgatcagtgccacattaccacatgagatc
ttggagatgaccaataagttcatgactgaccccatccgcatcctggtcaaacgtgatgag
ttgaccctagaaggaattaagcagttctttgtggctgtagaaagggaagaatggaagttt
gatacattatgtgacctgtacgacacgctgaccatcactcaagcagtcatattctgtaac
acaaagaggaaggtggactggcttacggagaaaatgagggaggcaaacttcacagtctcc
tcaatgcatggagacatgcctcagaaggaaagggaatccatcatgaaggagttcagatct
ggggcaagccgagtgctcatttccacagacgtttgggcaagaggtttggatgttcctcag
gtgtcattgataatcaactatgacctgcccaacaacagagagttgtatatccacagaatt
ggtaggtcaggtcgatatggccgcaaaggtgttgcgatcaactttgtgaagaatgatgac
attcgtattcttcgagatattgaacagtactattccacacagattgatgaaatgcctatg
aatgttgcagatcttatttaa
DBGET
integrated database retrieval system
