Latimeria chalumnae (coelacanth): 102353145
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Entry
102353145 CDS
T02913
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
102353145 (TDRD12)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102353145 (TDRD12)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102353145 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102353145
NCBI-ProteinID:
XP_014349483
LinkDB
All DBs
Position
Un
AA seq
1211 aa
AA seq
DB search
MIEIKVLKIEDPSCFWGRIIRGCGDLTENAEEYEKLQDKMNQLYHGGRKDLEEIKLSTLE
EGQVCVVYCKELRCWCRAVVESLMSSANDYLAECFLVDYAKYVNIQAKNVRGAIEAFVKL
PYRAKKFRLYGIKPLTLSVDLYEDKAKIIPARRWDSAAIQHFQSIVKASSQTEAKLCAIE
EDFFDVQLYVTYKDEKACVNDELVAKNFACCESPRDHKVRLLKNQDTQSCTSRSEASFEK
MIKCEKVSNLARTLWPGLLQGRVLGRVQEVSLERHGDNQTSFLNSESTSDSYKKTCDVGK
VDLASAENLNHCAAVSLSNSSDENSCAKIPSNQVMENNRITASFQFASEEAGYTVYEFLC
VSPVLSYASRFDFCKNLHWASDCCVLFSLVKLLFTSLIVHFSLYPFQVFKKDLMSMDYEA
YCSVFSTFHSLNYFWLVQFLNPDPLNADSPQVMHQKLPSSPWNQVLVHSVTKVTPCTTLE
MAPISEDLKKCLIRNKFVGPNLTESYCWPAVARGGDLIAVSHSGNNPLVYIPPLVTFIWF
STVHSSLPTRNGPLAVIVCPGWKKAQHVFDLLEEYTRCFRPLRAVLILVGLNKEEVKNVK
LAKGCEVVVTTPNSLTRLLKRHCFLFLRLCHLVLDEVDLLFAEANDQMLAILEYYKRAIT
AEERASAPQQIIAVGTRWDKHLENVVREHMSDPYIVVTAMEEASVYGNVHQVVQICLDSA
KTSLLLSVLNFTSDVLEKTLIFTSSVEEADVVFKTVATSAFAMIVHEDLSFRINEVLEEW
NKKFSSGTRVVLVLTDACIQALGITDATCVVHYGFPASPRIFGARLGCMIDNFRNLTDEV
GTADREFSKAKSVLLLTDRNACHAVGVLRFLEHTEAQIPPALVDFTAGILKAKEEMKYDR
PLCTSIKLYGVCRDSRMCPDRHQVHQQLDTPRRLSENETIPTEGCVSVLPLHIINATNYF
GRIVKKQEDQYKKLEVEMNNYYSQSCNRLSAKDLNKYALYGLQEGTVYLRVQFLEVIQRE
EDCLFYTVDVKYIDEGRTGYVKGHQLLVLPEKFNRLPPQAVEFIACRVKPIDNETDWNPK
VSRHILQKIKEVQHEAKIVLSLGNTVWIDPVVRVTKLKDLNTSINEYNIRSEILATGMGV
NNPEHIKQLQVLCREAMSTSDDSISKLQSLNGEESLDYATLQRDESYHAVIITEFFNPSN
FYVQIEENQKQ
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattaaggttttaaagatagaagaccccagctgtttttggggtagaataata
agaggatgtggtgatcttactgaaaatgcagaggagtacgagaaactgcaggataagatg
aaccagctgtatcatggaggacgtaaggacctagaggaaataaagttatctacattagaa
gaggggcaggtttgcgtagtttattgcaaggagctaagatgctggtgcagggcagttgtg
gagtcactcatgtccagtgcaaatgattacttagcagaatgctttctggtggattatgct
aaatatgttaacatccaagcaaaaaatgtacgtggagcaattgaagctttcgtaaagctc
ccatatcgggcaaagaaatttcgattgtatggtatcaagccactgacacttagtgttgac
ctttatgaggataaggcaaaaataataccagcaagaaggtgggatagtgctgccattcag
cattttcagagtattgtgaaagcatccagtcaaactgaggcgaagttgtgtgctattgag
gaagacttttttgacgttcagctttatgtaacatacaaagatgagaaggcatgtgttaat
gatgaacttgtagcgaagaattttgcatgttgtgaatcacccagagatcacaaggtgcgc
cttctgaagaaccaggatactcagagctgcacgtcaagatctgaagcttcttttgagaag
atgatcaagtgtgaaaaggtgtctaatcttgcacgaacactctggcctggattgttacaa
gggagagtattgggaagagtccaagaagtttctttggaaagacatggtgataaccagaca
tcctttttgaattcagagtctacttctgattcttacaaaaagacatgtgatgtagggaaa
gtggaccttgcatctgcagaaaacctgaatcactgtgctgccgtgagtcttagcaactct
tctgatgaaaattcatgtgcaaagatcccaagtaaccaggttatggaaaacaatagaata
actgcaagttttcagtttgcctcagaggaggcaggttatacagtatatgaatttttatgc
gtgtcaccagttctctcatatgctagtcgatttgatttttgcaaaaacttgcactgggca
agtgactgttgtgttttgttttctctagtcaaactgctgttcaccagcctcattgtccat
ttttctctttatccttttcaagtatttaagaaggaccttatgagtatggattatgaggca
tattgttctgtgttctccacattccacagccttaactatttttggctagtacaattttta
aatcctgatcctctcaacgctgatagcccacaagtaatgcatcagaaactaccttccagt
ccatggaaccaagtccttgtacactcggttacaaaagtgactccttgcacaactcttgaa
atggcacctatttcggaagacttaaaaaagtgtttaattaggaataagtttgttggccca
aatttgacagaatcctactgctggcctgcagtagcacgtggaggtgatttgattgccgta
tctcacagtggtaataatcctctggtgtacatccctccgcttgtgacattcatatggttt
tcaacagtccacagttcactacctactagaaatgggccattagcagtaattgtgtgtcct
ggatggaaaaaagcacaacatgtatttgatttgctggaagaatatactagatgtttccga
ccacttcgtgcagtgttgattctagtggggctaaataaagaagaagtaaaaaatgtaaaa
cttgccaaaggatgtgaggtggttgtcacaacaccaaatagccttacacggctgctgaaa
cgtcactgctttttattccttagactctgccaccttgttttggacgaggtggatttgttg
tttgcagaagctaatgatcagatgttggctatattagaatattataagagagccattact
gctgaagagagggcctctgctcctcaacagattattgctgttggaacccgctgggataaa
catttagaaaatgtggtgagagagcatatgagtgatccttacatagtggttactgcaatg
gaggaggcttcagtatatggaaatgtacatcaggtggtgcaaatttgcttggacagtgcc
aagacttcattgttgctgagtgtcttgaatttcacttctgatgtacttgagaaaacactc
atttttacctcctctgtagaggaagcagatgttgtgttcaagacagttgctacttcagcg
tttgccatgatagtccacgaagatctgtcattcaggattaatgaggttttagaagagtgg
aataagaagttcagttcagggactcgggtagttctggttttgacagacgcctgcattcaa
gctctgggaattacagatgcaacatgtgtggtacattatgggtttcctgcttctccaaga
atatttggagcccgtttaggctgcatgattgataatttccgaaacttgactgatgaggta
ggtactgcagatcgagaattctcaaaggctaaatcagtgttgctgctaacagatagaaat
gcatgccatgcagttggtgttcttcgttttctagaacatacagaggcgcaaattccacct
gcactagttgactttacagccggaatactaaaggccaaagaagaaatgaaatatgacaga
cctctttgcacatccattaaactttatggtgtttgcagggacagtagaatgtgtccggat
cgtcatcaggttcaccagcagctggatacaccgcgaagactttctgagaatgaaaccata
ccaacagagggatgtgtctcagttttgccattgcacattataaatgcaaccaactacttt
ggtcgcatagtgaaaaagcaggaggatcaatataaaaagcttgaagtggagatgaacaat
tactactcacagagttgcaatagactgtctgcaaaggacttaaataagtatgccttgtat
gggcttcaagaggggacagtttatttaagggtccaatttctggaagtcatccagagggag
gaagattgtctcttctatacagtagatgtgaagtacatagatgaaggcagaactggttat
gtcaaaggccatcaactgttagttctgccagaaaagtttaataggttaccaccacaagct
gtggagtttattgcatgtcgagtaaaacctatagacaatgaaactgactggaatccaaag
gttagccggcatattctacagaaaatcaaagaagtacagcatgaggcaaaaatagttttg
tccttaggaaatactgtctggattgatccagttgtacgagtcaccaaacttaaagacttg
aacacaagcataaatgagtacaatatccgctctgagattttagctactggaatgggagtc
aataatccagagcacatcaagcagctacaagtgctgtgcagagaagccatgagtacaagt
gatgacagcatctccaaacttcagtcattaaacggagaagaatctttggactatgcaact
cttcagagagatgaaagttatcacgctgtgatcataacagaatttttcaaccccagcaat
ttctacgtgcaaattgaagagaatcaaaaacagtaa
DBGET
integrated database retrieval system
