Latimeria chalumnae (coelacanth): 102353228
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Entry
102353228 CDS
T02913
Name
(RefSeq) heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03040
Spliceosome
lcm04010
MAPK signaling pathway
lcm04141
Protein processing in endoplasmic reticulum
lcm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102353228
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102353228
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102353228
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102353228
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcm01009
]
102353228
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102353228
03009 Ribosome biogenesis [BR:
lcm03009
]
102353228
03110 Chaperones and folding catalysts [BR:
lcm03110
]
102353228
04131 Membrane trafficking [BR:
lcm04131
]
102353228
03051 Proteasome [BR:
lcm03051
]
102353228
03029 Mitochondrial biogenesis [BR:
lcm03029
]
102353228
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102353228
Protein phosphatases and associated proteins [BR:
lcm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
102353228
Spliceosome [BR:
lcm03041
]
Complex B
Other components
Prp19 complex
102353228
Complex C
Prp19-CDC5 complex
102353228
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102353228
Chaperones and folding catalysts [BR:
lcm03110
]
Heat shock proteins
HSP70 / DNAK
102353228
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
102353228
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
102353228
Proteasome [BR:
lcm03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
102353228
Mitochondrial biogenesis [BR:
lcm03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
102353228
Exosome [BR:
lcm04147
]
Exosomal proteins
Proteins found in most exosomes
102353228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
CRIC_ras_sig
Ppx-GppA
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
102353228
NCBI-ProteinID:
XP_006003869
Ensembl:
ENSLACG00000006085
UniProt:
H3AB35
LinkDB
All DBs
Position
Un
AA seq
648 aa
AA seq
DB search
MSKGPAIGIDLGTTYSCVGVFQHSKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPSNTVFDAKRLIGRKFDDPVVAADMKHWPFMVINEGGRPKVQVEYKGEMKTFYPEEIS
SMVLVKMKEIAEAYLGKTITNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKIGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FIAEFKRKYKKDITENKRAIRRLRTACERAKRTLSSSTQASIEIDSLYEGTDFYTSITRA
RFEELNADLFRGTLEPVEKSLRDAKLDKAQIHDIVLVGGSTRIPKIQKLLQDFFNGRDLN
KNINPDEAVAYGAAVQAAILSGDKSDKVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEQYKAEDDVQREKINSKN
ALESLAFNMKSTVEDEKLKDKLSPEEKQKILDKCNEVISWLDRNQMAEKDEYEHQRKELE
KVCNPIITKLYQGAGAGGMPGGMPGGFPGAGGTSGASSGSGPTIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagggaccggccatcggtattgacctggggaccacttactcctgtgttggggtc
ttccagcatagcaaggtagaaatcatagccaatgaccaagggaaccgcaccactcccagc
tacgtggccttcaccgataccgagcggctcattggagacgccgccaagaaccaggtcgcc
atgaacccatcaaacacggtctttgatgctaagcgcctgattggccgcaagtttgatgac
cccgtagttgccgctgatatgaagcactggccctttatggtgataaatgaaggtggtcga
ccaaaggttcaggtggagtacaagggggagatgaaaaccttctacccggaggaaatctcg
tccatggtccttgtgaagatgaaagagatagcagaggcatacctgggaaagaccattacg
aacgcggtcgttactgttcctgcctacttcaatgactcccagcgccaggccaccaaggac
gctggcaccatctctggcctcaacgtcctgcgcatcattaacgagcccaccgctgccgcc
attgcctacgggctggataaaaagatcggttcagaaagaaatgtcttgatttttgacctt
ggtggaggcacttttgatgtgtccatcctcacgattgaagacggcatctttgaggtgaag
tccacagctggtgacacccacctgggcggagaggacttcgacaaccgcatggtcaaccat
ttcattgccgagttcaagcgcaagtacaagaaggacatcacggagaacaagcgtgctatc
cggcggctgcgcacggcctgcgagcgagccaagcggacgctgtcctccagcacccaggcc
agcattgagatcgactcattgtatgaagggacggacttctacacctccatcacccgagcc
cgctttgaggagctcaatgcagacctcttccgtgggaccctggagcctgtggagaagtcc
ctgcgggatgccaagctggataaggcccagattcatgacatagttttggtgggggggtct
acccgcatccccaagattcagaagcttctgcaagacttcttcaatggccgggatctcaac
aagaatatcaacccagatgaggcggttgcttacggagcagctgtccaggccgccattttg
tctggagacaagtctgacaaagtgcaggacctgctgctgctagacgtcactcccctctcg
ctgggtattgagaccgccggaggggtcatgactgctctcatcaaacgcaacaccaccatc
ccgaccaagcagacccagaccttcaccacttactctgataaccagccaggtgtgctcatc
caggtatttgagggcgagagggccatgacgaaagacaataacctgctaggtaaatttgac
ctgacggggatccccccggccccgcgaggtgtccctcagatcgaggtgacctttgacatt
gacgccaatggtatcctgaatgtatctgctgtagacaagagcaccggcaaggagaataag
ataaccatcaccaatgacaaagggcgtctaagtaaggaagatatcgagcggatggtccag
gaggcggaacagtacaaggcggaggatgacgtacagcgcgagaagatcaactccaagaat
gcgctggagtcgctggccttcaacatgaaatccacggtggaggatgagaagctgaaggac
aagctgagcccagaggagaagcagaaaatcctggacaagtgcaacgaggtcatttcctgg
ctggacaggaaccagatggctgagaaggacgagtacgaacaccagcggaaggagctggaa
aaggtctgcaacccgatcatcaccaagctgtaccagggagccggtgcaggcgggatgccg
ggcgggatgcccggcggcttccctggagccggcggcactagcggcgcctcatccggatcc
ggaccgaccattgaggaggtcgactaa
DBGET
integrated database retrieval system
