Latimeria chalumnae (coelacanth): 102353249
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Entry
102353249 CDS
T02913
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03013
Nucleocytoplasmic transport
lcm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102353249
03015 mRNA surveillance pathway
102353249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102353249
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102353249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102353249
NCBI-ProteinID:
XP_006008007
Ensembl:
ENSLACG00000007112
LinkDB
All DBs
Position
Un
AA seq
300 aa
AA seq
DB search
MAPSPTKRKDRSEDKSKDKVKDKTSAKDTGDKERGRDKTRKRRSASSGSSSSRSSESGKL
TADKNGKKRSRSSSSSGSSSSSSSGSSSGSSSSSASSRSGSSSSSRSSSSSSSSGSPSPS
RRRHDNRRRSRSKSKSPKRDEKERKRRSPSPKPTKVHVGRLTRNVTKDHIMEIFSSYGKV
KMIDMPVDRLHPHLSKGYAYVEFENADEAEKALKHMDGGQIDGQEITATAVLAPRPRPLP
RRFSPPRRMPPPPPMWRRSPPRIRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggctccatctccaaccaagcgtaaagatcgctccgaagacaaatccaaagacaaagta
aaggataagacatccgcaaaggacacaggtgacaaagaacgtgggcgtgacaaaacacgt
aagaggaggagtgcgtccagcggcagcagcagtagcaggagcagcgaatcagggaagcta
acagctgataagaatggcaaaaaaagatcccgttccagttccagctctggctctagctcc
agctccagctccggttccagcagtggctccagttcctcctcggcatcgagccgctccggg
agttccagcagttctcgcagctccagcagcagcagttcctcaggctctcccagcccgtcc
cgtcgccgacacgacaacaggaggcgatctcgctccaaatcaaaatcacctaagagagat
gagaaagaacggaagcggcgtagccctagtcccaaaccaacaaaggtccacgttggcagg
ctaacgaggaatgtcacaaaggatcatataatggaaatcttctccagctacgggaaagtg
aaaatgattgatatgcctgtggacaggttgcacccacacctctcgaagggatacgcatat
gtggaatttgagaatgcagatgaagcagagaaagccctaaagcacatggatggaggtcag
attgacgggcaggaaatcacagccacagcggtgttggcgcctcgtcccaggccgctgccc
cgcagattcagcccacccaggaggatgccacccccaccgccaatgtggcgccgttcccca
ccacgtataaggagaagatcaaggtccccacgccgccggtctccagtgcgaagacgttcc
agatcacgatctcccggacgccggcgccatcgcagccgatccagctccaactcttcacga
taa
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