Latimeria chalumnae (coelacanth): 102353566
Help
Entry
102353566 CDS
T02913
Symbol
SOX1
Name
(RefSeq) SRY-box 1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102353566 (SOX1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102353566 (SOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102353566
NCBI-ProteinID:
XP_006006295
Ensembl:
ENSLACG00000005331
UniProt:
H3A8N4
LinkDB
All DBs
Position
Un
AA seq
342 aa
AA seq
DB search
MYSMMMETDLHSPGPQTSANPGQTGPNGGGKSNQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLTAGGGAAVGVGMGVGVSAAGVAQRLESPGGPGSAASAGYAHMNGWANGAYPG
SVAAAAAAAAMMQEAQLAYSQHPGTGAHHHPHHHHPHNPQPMHRYDMTALQYSPISNSQS
YMSASPSGYGGISYTQHQSSAVASTGSLGALGSLVKSEPSVSPPVSSHSRGPCPGDLREM
ISMYLPPGEGGDPSAQNRLHSLPQHYQSTTTGVNGTVPLTHI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggaaacggacttgcactcccccggcccccaaaccagtgcgaat
ccggggcaaacggggccaaacggcggaggcaaaagcaaccaagaccgagtcaagagaccc
atgaacgccttcatggtgtggtcccggggccagaggagaaagatggctcaagagaaccca
aagatgcacaactcggagatcagcaagcggctgggggctgagtggaaagtgatgtctgag
gctgagaagagacctttcatcgacgaggcgaaaaggctgagggctctgcacatgaaggag
catccggattacaaatatcgaccccgaaggaagaccaagactctattaaagaaggacaag
tattccctggcgggagggctgctgacggccgggggaggcgccgctgttggtgtgggcatg
ggggtcggggtgagtgcggctggggtcgcgcaacgattagagagccccggcggccctggc
agcgctgcaagtgcgggttacgcacatatgaacggttgggctaacggggcttatccaggc
tcagtggcagcggctgcggcagctgcagccatgatgcaagaggctcagcttgcttacagt
cagcacccaggtacgggggcacaccatcaccctcaccatcatcatcctcacaatccccag
ccgatgcatcgttatgacatgacagctctccaatacagccccatctccaactcacagagt
tacatgagcgcttctccttcgggctatgggggcatttcatatacccagcatcaaagctct
gctgtggcatcaacaggaagccttggagcactcggatcactagtgaagtctgagcctagt
gtcagcccccctgtcagctctcattctaggggtccatgtccaggagatctgagggaaatg
atcagtatgtatttaccaccaggagaaggaggtgatccgtcggctcagaatagacttcat
tcgctccctcagcactatcagagtaccactacaggtgttaatgggacagtcccattgaca
catatctaa
DBGET
integrated database retrieval system
