Latimeria chalumnae (coelacanth): 102353600
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Entry
102353600 CDS
T02913
Symbol
SNW1
Name
(RefSeq) SNW domain containing 1
KO
K06063
SNW domain-containing protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03040
Spliceosome
lcm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102353600 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102353600 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102353600 (SNW1)
Spliceosome [BR:
lcm03041
]
Complex B
Other components
Prp19-related factors
102353600 (SNW1)
Complex C
102353600 (SNW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
102353600
NCBI-ProteinID:
XP_005990144
Ensembl:
ENSLACG00000013254
UniProt:
H3AZJ0
LinkDB
All DBs
Position
Un
AA seq
536 aa
AA seq
DB search
MALTSFLPAPTQLSQDQLEAEERVRAQRSRQTALVSSRREPPPYGYRRSWVPRCLEDFGD
GGAFPEIHVAQYPLDMGRKKKASNALALQVDAEGKVKYDAIARQGQSKDKVIYSKYTDLI
PKEVMDEDDPELQKPDEEVIKEVTEKTRSALEKSVTQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAKVERKMAQKEKEKKEEKLRELAQIARERRAGIKSHGEKEDTEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKIQRDQDRDVSELIALHPNQNPRTSNEPQYDQRLFNQSKGMD
SGFAAGEDEMYNVYDQPWRNSRDTAQNIYKPSKNVDKEMYGDDLETLMKNDRFVPDKEFS
GSDRRQRREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDTGRSKEYEHDGKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcactagttttttgcctgccccaactcaactgtcccaagaccagcttgaggct
gaggaaagggttcgagcccagagatcacgacagacggcactggtatcttcacgaagagag
ccccctccttatggatacagaagaagctgggtaccacgatgcctagaggatttcggagat
gggggtgcgttcccagaaatccatgtggcgcagtacccactggatatgggtcgaaagaag
aaggcatccaatgctctggcccttcaggtggatgcggaagggaaagtgaagtatgatgcc
attgccagacaaggccagtccaaagacaaggtgatttacagcaaatacacagatttgatt
ccaaaagaggttatggatgaagatgatccagagctacagaaaccagatgaggaagtcatc
aaggaggtaacggagaagaccaggtcagctctggagaaatcagttactcagaaggttgcc
gctgctatgcctgtccgagcggctgacaaactggctcctgcacagtacatcaggtatact
ccatcccaacagggagtggcttttaactctggagccaaacagagagtcatccggatggtg
gagatgcagaaggaccccatggagcctccacgatttaagattaataagaagattcctcgg
ggtcccccctctcctcctgctcctgtcatgcactctcccagcagaaagatgactgtaaaa
gaacagcaggaatggaaaatcccaccatgtatctcgaactggaaaaatgcaaagggttac
accatcccactagacaagcgtctggctgcggacggaaggggactgcagactgtccacatc
aacgagaactttgccaagctagctgaggcactctacattgctgatcgaaaggctcgagaa
gctgtggagatgcgtgcaaaggtggagaggaagatggcacagaaggagaaagagaagaag
gaggagaagttgcgagaattggcccagattgccagggagaggcgagctggtattaagagc
catggagaaaaagaggacaccgaggctcgggaacgtgatgagattcgacatgatagaaga
aaagagaggcagcatgaccggaacctctccagagctgctcctgacaaacgatcaaagatc
cagagggaccaggacagagatgtcagtgaactcattgctctgcacccaaaccagaaccct
cggacctccaatgagccccagtatgaccagagactttttaatcagagtaagggaatggac
agcggctttgcagctggagaggatgagatgtacaatgtttatgaccagccatggaggaac
agcagggatacagcacagaatatctataagcctagtaagaacgtggataaggaaatgtac
ggcgacgatctggaaacactaatgaagaatgaccggtttgttccggacaaggagttctct
ggttctgatcgacgccagcgccgggagggtccagtccagtttgaggaagatccctttggt
ctggataagtttttggaggaagccaagcagcatggtggctccaagcggccctcagacact
ggccggtccaaggagtatgaacacgatggcaagaaacggcgaaaggagtaa
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