Latimeria chalumnae (coelacanth): 102353724
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Entry
102353724 CDS
T02913
Symbol
TAF4
Name
(RefSeq) TATA-box binding protein associated factor 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102353724 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102353724 (TAF4)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102353724 (TAF4)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102353724 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
102353724 (TAF4)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102353724 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
RE_AlwI
Motif
Other DBs
NCBI-GeneID:
102353724
NCBI-ProteinID:
XP_014344201
LinkDB
All DBs
Position
Un
AA seq
890 aa
AA seq
DB search
MAAGSDLLDEVFFNTEVDEKVVSDLVGSLESQLAASGHHTSEVRAQGAGNHVASSGVGGN
ASVQTESKMGLAQEMAKAAGAGVQGGVINNNARSQGSALDATVITSSSAGSEAPGALSQA
KSVVISAMATPVPNHGAGSGKIGTSTVQTLNGSNVVMNSHTSGSAGTFAGTTGSGTTAPA
AATVVNNGPGSVVKGNVNSTVVPAAPNTVIQTPFLNTPNVSSTVISSQPAAAASNSSPSS
AAVAGSGVALQSPLLNSQPAPGLTGGIALGAGAPVIKTEAPKTIIQTPQQPLTASNQPNT
TNMVLGQTMQAALHNVVAPNSGGLPPQPPATPAGIGKAVVSTVAQSIPRTPAAAAAVAGG
IRTTMAPPVLAPRLPQPPQTQPNIQNFQLPPGMVLVRSDSGQFLMIHQQTLAQMQAQAQA
QSQSQNAMAPRPATPTSAPSVQISTVQVQFKFVKFPQSQIVLGSAPQTAALGTSAAVQPG
TSPRPVQGAGTSSTTATEIMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDG
KMEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLQQPTTQATTA
LTAVVLGSTVQRTAGKATATVTSTLQQPVISLAQPTSQAGKQGQPTSLVIQQAPQPGARP
PQVTLTQPPMVTLRPPQNRIMLTTQHQVQLKPLQAVPLMKPTVLPGTKAPPSFSAQAAVA
QKNKLKEAGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDEAFLFS
APLNRRILEIGKKYGITEIHPDVVNYMSHATQHRLQNLVEKASEIAQQRNISYKDDERYE
QVSDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKASAFISSLLLSWLH
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggttcagatctgctggatgaggttttcttcaacacggaggtggacgagaaa
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctcgggccaccacacg
tccgaagtgagggcccagggggccggcaaccacgttgccagctccggggtaggaggcaat
gctagtgtccaaacagagagcaaaatgggacttgcacaagagatggcaaaagcagcaggg
gccggtgtgcaagggggtgttattaataataacgccaggtcccagggctcagcgctggat
gccacagtgatcacctcctcctccgcggggtccgaggctccgggggctctcagccaggcg
aagtcggtggtcatcagcgccatggcaacgccggtccccaaccacggggccggcagcggg
aagatcgggacctccacggtgcaaactttgaatgggagtaacgtggtgatgaactctcac
acttcaggaagtgccgggactttcgcggggacgacaggctccggcacgactgcacctgct
gccgccacggtggtcaacaatggacctgggtcggttgtcaaagggaatgtaaatagtact
gttgtgcccgccgcccccaacactgtcatccagacgcctttcctcaacacgccgaacgtt
tcctccaccgtcatctcctcgcagccggcggctgcggcctccaactcgagcccgagcagc
gccgccgtcgccggatcgggggtcgccctccagagcccgctcctgaacagccagcccgct
ccgggcttgacgggcggcatcgccttgggagcgggggcgccggtgatcaagacggaggcg
cccaaaaccatcatccagaccccccagcagccgctgacggccagcaaccagcccaacacc
accaacatggtcctcgggcaaactatgcaagctgcgcttcacaacgtggtggcccctaat
tcgggaggattgcccccgcagccccctgccactccggccgggataggcaaggctgttgtc
agcaccgttgcccagagtatacccaggactccagccgcagctgctgcagttgctggcggc
attagaactactatggctcctccagttttagcaccccgcctccctcagccacctcagact
caacccaacattcaaaactttcagctcccacctggtatggtgctcgtgcggagcgacagc
gggcagttcttgatgatccatcagcaaaccctcgctcaaatgcaggcgcaggcccaggca
cagtcccagtcccagaacgccatggctccacgtcctgcaacacccaccagcgctccctca
gtccagatctcaaccgtacaggttcaatttaaatttgttaaattcccacagtctcagatt
gtgttgggaagtgctccgcagacggctgctcttgggacgtcagcagcagtgcaacctggg
acttctccaagaccagtgcaaggagcaggaacatcgtcaaccactgccacagaaattatg
gaaaatgtaaagaaatgcaagaattttttatctacgttaattaaactggcgtcatctggt
aaacagtcgaccgaaacagctgcaaatgtcaaagaactagtacaaaatctactggatggc
aaaatggaagcagaagattttacaagcaggttataccgagaactaaattcttcacctcaa
ccataccttgtgcctttcctgaagaggagtttacctgccttgagacagctaaccccggac
tcagcagcttttattcagcaaagccagctccagcagcccacgacgcaggcgaccacggca
ctcacagccgtggtactggggagcacggtacagcggacagcggggaaagccaccgccacg
gtaacgagcacgcttcagcagcctgtcatcagcctggcgcagcccacgtcacaagctggc
aaacaggggcagcctacgtcactggtcatccagcaggctccacagcctggtgccagaccg
ccacaggtcacactgacacaacctccaatggtaaccctgagaccgcctcagaatcggatc
atgttgaccacacagcaccaggtgcaattaaagccgctccaagcagtccctctaatgaaa
ccaacagtattacctggaaccaaagctcctccgtccttctcagctcaagctgccgttgct
cagaaaaacaaactgaaagaagctggaggaggttcttttagggatgacgacgacattaat
gatgttgcatcgatggccggagtgaacctgtcagaagaaagcgcacggatattagccaca
aactctgaactagtcggcacgttaacgaggtcgtgtaaagacgaagcatttctcttttca
gcacctttgaacagaagaatattggaaatcggtaagaaatacggaatcacagaaattcat
cccgacgtggtcaactatatgtcgcatgcgacgcagcacaggttgcaaaaccttgtagaa
aaagcctcagaaattgcacaacagagaaacatttcttataaggacgatgagagatatgag
caagtgagtgatgtgcgggcacagctcaaattctttgaacaactcgatcaaatagaaaaa
cagagaaaagacgaacaggaaagagaaattttaatgcgagcggcaaaggcaagtgctttt
atttcctctctcttgttaagctggttgcattaa
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