Latimeria chalumnae (coelacanth): 102353768
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Entry
102353768 CDS
T02913
Symbol
HEATR1
Name
(RefSeq) HEAT repeat containing 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102353768 (HEATR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcm03009
]
102353768 (HEATR1)
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102353768 (HEATR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_2
Cnd1
HEAT_EZ
RTP1_C1
Vac14_Fab1_bd
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
102353768
NCBI-ProteinID:
XP_014340340
LinkDB
All DBs
Position
Un
AA seq
2189 aa
AA seq
DB search
MTSLAHQLKRLALPQNDPSLLFRKETASLLFEPKEAANLDRDTFFAIGCTGLDELIGLDA
SFEEFQSILFSQSSKSLERSVQTKLVNQQLDDSISLFLTRVSPYFMLKPAHKCLEWLIHR
FHIHLYNQDGLIGCVLPYHETRVFVRVIQLLKISDPTHRWNWLELIQKPGIPLARGTLIT
HCYKDLGFMDFICSLVTKAVKVCVFIYLFIYETLQRLAERGLLMTVIPQYYTVTILLMFV
SAAQLRVLFSFYASTIVCALDAAEKITDTIIAKLLPYIQKGLKSPLPDYRAATFMIVCEL
GVKVVLEASLLNTLTLQICKSLAKTSSLLREGLGCLIVLLQNQKGASLGEKPFGYLCRVA
GLVTALQGIAATHDIGPFLQYLLPYLVCSIMAETATDDEQPEEAVSQTPAALLEAVLSTI
TLENNLDHTLANTIIEQYISYGTNGDTSPEKMSVLNRKLLPLVRLFESKYPKTLDVVLEG
HLKNVLNQEEQDLFHQFISLSMSSGKYQLLADSDTSLLLSLNHPQPAVRRLAVQHLEEVI
RTSQEGFEESFLQEAVLARLKDDCPEVILPALQALQAFSRHLGQEATVTSLLGLFKRVDL
SKDDQWYQVLEGALKGLTSGHLLAGNEKLLNQVVMDLLNFMAITVPDSKSAEFKLAVSIA
NSGLCSLHPLLEGWPQALQKIVKSSKANDILGVANQRLIQILAGNLSAMEPSTMLQMVDE
LIEKAECECSTTGQKVAFHLICSALLQNCSALADASHLQTALKIYSLLERKIKKMIKKNY
NLEVPSKWFPDTVEGSSLPVQLLTDYIRNLSSGQTVEEEHTAMMLLLLKSFIGALKPPTS
FPKTNIWWNPESLDVQSCDYLHLLIGLFDLLVCGSSEGNIAISFRKLMQLLFKVHLQAPE
DLFRFFSVLWSYSYNHANQLGCTVNAVLQTQAFYIGQVLLAAQTVQKKKQLASPSSPATI
SLIINLSNPVREVRRGAAACLQVLSGVESPFSPIIDKLVHTVEELIADPVYLSQALGSLF
EELQAKTKQKSHQKKLSGALEHLLACVRDSKCPSYIARVLLKTLEAVNSEVVLGHVLPVM
ERLLQKAGGQPAALLKDECLLLHLILGKYDEDSAPLLGKEQQSFELFITALTTAEEVCFG
LPTFQIIALEQITKPFFAALPDGKLQQRLLGVLFNLLVDCKNPLCAQAVNSAFKGISVDA
EQVAVELGSFEKAKSPATVQQTRRQKMQQQRKPQEAESATESGTMNWQRITLILELLQHK
KKLKRPQALVPALFNLLARCLEPTALEQENLEYTKQLVLSCLLNICQKLSPDGGRISKDV
LDKEKFNVELIVHCVRVSDVPQTHHHALLLLGAAAGMFPDKVLHNIMPIFTFMGANVMRL
DDAYSFQVINKTVQTVIPALIQAEDEGSLEAEGNIESVVVKITHVFVDALPHVPEHRRLP
LLAQLVNTVGAERFLWILPVLLFKQHVTKTTSASAVGDKDSALEGDISFWISVCCEFKVQ
EQLQSLVKILQYLASLPENKEEDVPGQKKPRQKKSETEATAALLFNVESHSSKQLRHFKF
LSVSFMARLLASHSFVGKVAACDEMEQEGLQQLEQRLLEEVLCYINVVARSVEVNADQPT
AKFWRALLNKSYDVLDKVNALLPTESFIPVIRGLMGNPLSSVRRKAMDLLNNKLQQRTQW
QEKQAQLLLELVGELLSIAQHKGKEEEEQAINRQTALFSLKLLCKCFGARSQDPFLLVLS
VAVDLITTEGEEKNVLGSALLCIAEVTSSIKALAIPQLPRLMPAVLKILKNRQQLLSDEI
YLLSAVTALQRMTETLPHFISPYLLDILTQVTHLAKTAVSMGPSSQLNLRMTSLQTTLAT
KLPPRVLLPAVAKCYNKHVDSHQGCLGPLMEILQEHIAHLEKEQLSSHQSELTTFFLKAL
DFRAEHSEDDLEKVGDTEGHVINCLLTMIMKLSEVTFRPLFFQLFNWSKTEGFSKDRLLT
FCRLTDCIAEKLKGLFIFFAGHLVKPFADILVQTNTVKTDDAFFDSENNTEKSCLLLQFV
IDCLHKIFLHDTQRFVSKERAETLMMPLVDQLENMLGGEENFQKRTTEHLIPCIGQFSVA
IDDDSLWKPLNYQILLKMRDSSPKVRFAALIALLELAGKLRENYTVLLPESIPFLAELME
DESEEVEHQCQKVVQQLEIILGESLQSYF
NT seq
6570 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttagcacaccagctgaagcgcctcgccctcccgcagaatgatcccagcctc
ctgtttcggaaggagacagcctctctgctgtttgaacccaaggaagctgctaatctagac
agagacactttctttgcgattggatgcactggtctggatgagctcattgggttagatgca
tcttttgaggaattccagtcgattctcttcagccagtcttcgaagagcctggaacgcagc
gttcaaactaaactggtgaaccagcagttggatgacagcatttcattgtttctaactcgc
gtgtctccctacttcatgctgaagcctgcacacaagtgtctggagtggctgattcacagg
ttccacattcatctctacaaccaggacggtctgattggatgtgttctaccttaccatgaa
accagagtgtttgtacgagttatccagctgttaaaaatcagcgaccccactcacagatgg
aactggctggaacttattcagaagcctggcatccctctagcaaggggtacgttgatcaca
cactgctacaaagacttgggcttcatggatttcatctgtagtctcgtgaccaaagctgtt
aaggtttgtgtttttatttatttatttatttatgaaactcttcaaaggctggctgagaga
ggtctgttaatgacagttatacctcaatactacactgtcactatcctgctgatgtttgtc
agtgctgctcagttacgagtgttgttttccttttacgcctccacaattgtgtgtgccctt
gatgctgcagaaaagataacagacacaataatagccaagttgctgccttatatccagaag
ggtttgaagtcacccttgccggattacagagctgccaccttcatgatagtctgtgagctg
ggggtgaaggtggttctggaagcctccctgttgaacaccctgacgctgcagatctgcaag
tcgctggcaaaaacctcctctctgcttcgggaagggctgggctgcctaatcgtcctgctg
cagaatcagaagggagcgagcctgggggaaaagccttttggctacctgtgtcgtgttgcc
gggctggtcaccgctctgcaagggattgcggcgacacatgacattggtccctttcttcag
tacctgctcccatacctggtctgctcgatcatggcagagacggccactgatgatgagcag
ccagaagaagccgttagtcaaactcctgcagctctgctggaggccgtgctttcaaccatt
acactggaaaacaacctggatcacacattagcaaacacaattatcgaacagtacatctct
tatggtacaaatggggacacgagtccagagaaaatgtctgttttgaatcggaaacttctg
cctttggttagactttttgaatcaaagtatcctaaaacattagatgttgtcttagaagga
cacctgaagaatgtcctgaaccaagaagagcaggatctctttcaccagttcatttccctt
tctatgagtagtggaaaatatcagcttttggccgactcggatacttccctattgctgagc
ctgaaccacccccagcccgcggttagacggctagccgtccagcacttggaagaagtcatc
cggacctctcaggagggttttgaggaatcctttctccaagaagctgtcctagccaggctg
aaggatgactgtccggaagtcattttgcccgctctccaggctcttcaggctttttctaga
caccttggccaagaagcaaccgtcacgagcttattgggtctctttaagcgagtagatctt
tccaaggatgaccagtggtaccaggttctcgagggggcactaaagggcctaacgagtggt
cacttactggctggaaacgaaaagctgctaaaccaggttgtgatggacctcttgaacttc
atggccattactgtcccagattctaaatctgccgagttcaaactcgcagtcagcattgcg
aattctggcctctgctctttgcatccgctgttggaagggtggccacaagcccttcaaaaa
attgtcaagagcagtaaggctaatgacatcctgggtgttgccaaccaacgattgatccag
atattggctggcaatctgtcagcaatggagccctccacaatgttacagatggtggatgaa
cttattgaaaaagcggagtgtgagtgcagtaccacaggccagaaggtggctttccatctg
atttgctcggcgcttcttcagaactgcagtgcgctggcggacgccagccacttgcaaact
gctttgaaaatttacagccttttggaaagaaaaataaaaaaaatgatcaagaaaaattat
aatctggaagtcccaagtaagtggtttcccgacacagtggaagggagctctttgccagta
caacttctgactgactatatcagaaatctcagcagcggacagactgtggaggaagaacat
acagcaatgatgctcttgctgcttaaaagcttcatcggtgctctcaagcctccaacgtct
ttccctaaaactaacatctggtggaacccagaaagtttggatgtccaaagttgcgattac
ctgcacctcctgattgggttatttgaccttcttgtttgtggtagcagtgaagggaacatc
gccatcagctttagaaaactaatgcagctgctctttaaggttcatttgcaggcccctgag
gatcttttcaggttcttctcagtgctgtggagctacagttataaccatgctaaccagcta
gggtgtacagtgaatgcggtgctgcagacgcaagccttctacattggccaagtattgctt
gctgcacagactgttcaaaagaaaaagcagctggcatccccttcttccccagcaacgata
tccctgatcatcaatttgagcaaccccgtcagggaggtgagacggggagctgctgcctgt
ttacaggtcctgagcggagtggagtccccattctctcccatcatcgacaagctggtgcac
acagtggaggagctgatagctgaccctgtctacctcagccaggctttgggtagtctattt
gaagagctacaggcaaagaccaaacaaaaatctcaccagaagaagttgtctggtgccttg
gaacatctgctggcgtgtgtgcgagattccaaatgcccgtcatacatagcgcgagttctg
ttgaagacccttgaagcagttaacagtgaggtggtgctgggccacgtgctgcccgtgatg
gagcggttactgcaaaaggccggtgggcagcctgcagcgcttttgaaggacgagtgcctc
ctcctgcatctcatccttggaaaatacgatgaggactcggcaccgctgttgggaaaggag
caacagagcttcgagctcttcattacggcactaactacagctgaggaagtctgctttggt
ttacccacctttcagatcatcgctcttgaacagattactaagccattctttgctgccctg
cctgatgggaaacttcagcagagactgttgggagtgcttttcaacttgttggtggactgc
aagaatccactttgtgcacaggcagtaaacagtgctttcaaagggatttcggttgacgct
gagcaggtggccgtggaattgggatcctttgagaaagcgaaaagccctgccaccgtgcag
cagacaaggaggcagaagatgcagcagcaaaggaaacctcaggaggccgaatcggctacg
gagtcgggcactatgaactggcagcggatcaccctcatcctggaactgctgcagcacaag
aagaagctgaagaggccccaggccctggtccctgccctctttaaccttctcgccagatgt
ttggagcccacagccttagagcaagagaacctggagtatacaaaacagctggttctcagc
tgtttactgaacatctgccagaaactgtccccagatggaggcagaatcagcaaagatgtc
cttgacaaggaaaagttcaatgtggagttaatcgtccattgcgtgagggtgtcagacgtg
ccgcagactcaccatcatgctttactgctgcttggggctgccgcagggatgtttccagat
aaagttcttcacaacatcatgcccattttcacgttcatgggtgccaatgtgatgcggctg
gacgatgcctatagctttcaagtcattaacaagaccgtgcagactgtcatcccagcactt
atacaggctgaggatgaaggttctctggaggccgaagggaacattgaaagcgtggtggtg
aagatcacgcacgtgtttgtggatgccctgccgcacgtgccggagcatcgccggctgccg
ctcttggcacagctggtgaacactgtgggagcggagcgcttcctgtggatcctaccggtg
ctgctcttcaaacagcacgtcactaaaaccacttcagcctcagcagttggagacaaggat
tctgcactggagggagacataagcttttggatttcggtttgctgtgagtttaaggtgcag
gagcagctccagagtctggtgaagatcttgcagtacctcgcctcgctccctgagaacaaa
gaggaagatgttcctggtcagaagaagccccgccagaagaagagtgaaaccgaagccaca
gcagcgctcttgtttaatgtggagagtcacagcagcaagcaactgcgccattttaaattt
ttgtcagtttctttcatggcccgtctcctagcttcacacagctttgttgggaaggttgca
gcttgtgatgagatggaacaggagggcttacagcagcttgaacaaaggttactggaggag
gttctctgctacattaatgtggtggcccgctcagtcgaagtgaacgctgatcagccgaca
gccaagttttggagggctcttctcaacaaatcctatgatgttttggataaggtgaatgcc
ctgctgcccacagaatcatttattcctgtcatcagaggcttgatgggcaatccgctatct
tctgtcagacggaaggcaatggacctccttaacaacaaactacagcagcggacgcagtgg
caggagaaacaggcgcagctgctgttggagctggttggtgagctgctttccatcgcacaa
cacaaagggaaggaagaggaggagcaggccattaacagacagacggcactgttcagcctg
aaactgctgtgcaagtgcttcggtgctcggagccaggacccatttttgcttgtgttgagc
gtcgctgtggacctgattacaacggaaggggaggagaagaacgtgctgggaagtgcattg
ctgtgcatagcagaggtcaccagctcaataaaagcactggcaataccacagcttccaaga
ctgatgccggcagtgctgaagatcctgaagaacaggcagcagctcttatcggacgagatc
tacttgctcagtgcagtcacagcgctgcagagaatgaccgaaacccttcctcacttcatc
agcccgtacctgctggacatcttaacccaggttacgcacttggcaaagactgctgtaagc
atgggcccgtcttctcaactgaacctccgaatgacctcactgcaaaccacattggcaaca
aagttgccccctcgagtccttctgccagcagttgccaagtgttacaataaacacgtcgac
tcgcatcagggctgcttgggtccacttatggaaatccttcaggaacacattgctcacctg
gagaaagagcagcttagctctcatcagtctgaactcacaacgttcttcctcaaggccctg
gacttccgagcagagcactcagaggatgacttggagaaggttggtgacacggaaggccat
gttattaactgcttgctcactatgatcatgaagctctctgaggtcacgttccgaccgctc
ttctttcagctttttaactggtccaagaccgaaggtttctctaaagaccgacttctaaca
ttctgccggttgaccgactgcattgccgaaaagttgaaaggattgttcatattctttgct
ggccacttagtcaaaccttttgctgatattttggttcaaaccaacacagtaaagactgac
gatgctttctttgactcggagaacaacactgaaaagagttgcttgctgcttcagtttgtc
atcgactgcctgcacaaaatcttcctgcacgacactcagcgctttgtcagtaaggagaga
gcagagacactgatgatgccgctagtggatcagctggagaacatgttgggaggagaagag
aacttccaaaagagaacgactgaacatctaattccatgcattggtcagttctctgttgct
attgatgatgactcgctctggaaacccttgaactaccagattctgctgaagatgagagac
agttctccaaaggtccgatttgctgcattgattgcattgcttgaactggcgggtaaactg
agagaaaattacacagtgttgttgccggagtcaattcctttcttggcagagctcatggaa
gatgaaagtgaagaagtggaacaccagtgtcagaaagtagtgcagcagctggagattatc
cttggcgagtcccttcagagctacttttaa
DBGET
integrated database retrieval system
