Latimeria chalumnae (coelacanth): 102353846
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Entry
102353846 CDS
T02913
Symbol
ARHGEF12
Name
(RefSeq) Rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04270
Vascular smooth muscle contraction
lcm04625
C-type lectin receptor signaling pathway
lcm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102353846 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102353846 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102353846 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102353846 (ARHGEF12)
Membrane trafficking [BR:
lcm04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102353846 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
102353846
NCBI-ProteinID:
XP_014350378
Ensembl:
ENSLACG00000009264
LinkDB
All DBs
Position
Un
AA seq
1557 aa
AA seq
DB search
MSGTQYSGERFPIRKPTRHGSILSKDPPPDKKHKSDKSSAVSHDFDPTDSPSRKINSNGD
DSKHEPYGLVQRCVIIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHIEVVKLIKSGSYVALTVLGRPPGSPQIPLADPEGDLGAFGQCQSSAMTSQHS
PGQGGNDRNSTDRITGPVLMGEENNIVHNQKVEILRKMLQRENQQLQLMKEEGSRNPTPR
TQKDIQEAKKHITQLQEQLDKATGTSQDGVHSPKLLSDPLQIREAEVDGADSEQSLHTRN
NSSGTDRTPPNSTVSDLFASGSSIFSESPCQRDVPSLSPKVAPKDGTNSYSHPDADENQD
TDSQSSVGSPSARVGPQIIGAEDDDFDTEQEQINGQCSCFQSIELLKCRPAHLAVFLHHV
VSQFDPAPLLCYLHTDLYKQTSSKETRRIFMEFHQFFLDRGANLKLLAPEAVAVDLEKRR
PEFIPEELHRQHIQAMQESVLPEVQRLLEDFRQKRSMGLTLAESELSKLDSERVRDRVAL
ERERASAEQIISKIEEVLITLQSSEEEKSLTVHYLIVMYMKHLGVKLKESRNLEHKRVRM
SFLPKIKQSIKKEREGEEKVKKRVFPSILGPPRRPSRQDSGAIGRAMELQNKRHTKQPSQ
TPLSPSDSSDASKLRQSFLSSDGTDTSHLLSNQMSPQSVGSSSQESSRECESGSTPVSAV
LRQPGETSASTDSSDSVTRIPNLVFDFPSPPLEQLQEEDREGGRLEVLPYGEVHSDEEGY
NFELDGDPPSWQQLVSRELLSGLKAHEIKRQEVINELFYTERAHVRMLKVLDQVFYQRMS
QDGILPPSDLKHIFSNLDEVLQLHVDLNEQMKAIRKKSDNSVIDQIGELLSWFSRAEEGK
LKKAAATFCSNQPFALELIKSRQKKDSRFQNFMLEAESNPLCRRLQLKDIIPTEMQRLTK
YPLLLENIAKYSEQEEEKDKVKKAADCCRQILNFVNQAVKEAENKQHLEDYQRRLDLSYL
KQSESPMLDEFRNLDLTKRKMIHEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVL
RCHSKNLAGTADTKHIFSPVIKLSTVLVRPVATSEYNDVLTLCRWQYLVGQQAGSGKTKP
HNKVIALPQQAPPPAHEEEEEEEMNPVEHQKNNQNVSRVTTGIEQPQEKEPGLESAEKLK
AEEEEGHCLQQEVAGRTEFAQMRGMEAITQESETMLHYRNKVHDLPLFPHQNRATEALRN
LELLKELLNHLFMVDEDVFDSLNSFQRFSIENRALLHQESLDSSPLGIPEYQPHNLRPQL
TLEEIPQRNGKPQTPSDSAAQDGVRVLSSGGSRTEHLISSDVEESEDLSPVAGPEEGQGE
IVADEGGEQFFDAPEAHSDVNLSGFKRMENPEKQKGEEEEVQAQPRVQGKYLILDGYGEI
QESCTDDDLDPSQMAECSGHVPTTDCMDQSRNSMGESRSDPRKFLSSSDYFSPLQSSRGD
SLPGIRKLLCAPDVWNQIEQHIHQIQVDLEHLKETEERYSELSHRLAGSAPEEEDKS
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacacagtacagcggagagaggtttcccatcagaaaacctacaaggcatggc
agtattctcagtaaggaccccccgccagacaagaaacacaagagtgataaatctagtgct
gtgtcacatgactttgacccgacagatagtccctccaggaagataaactctaatggggat
gacagtaaacacgaaccttacggtttggttcagcgttgcgtgatcattcagcgagatgag
aatggattcggtctgacggtcagtggagataatcctgtctttgtccagtctgtcaaagaa
gatggcgctgcaatgcgtgcaggagtgcagactggagaccgcatcatcaaggtgaatggg
accttagtgacacattccaaccacattgaggtggtgaaactgatcaagtcgggttcatat
gtagcccttacagttctgggtcgcccacccggatcaccccagattccattagctgatccg
gagggggatctgggagcatttggacagtgccagagttctgccatgacatcacaacattcc
ccagggcaaggaggcaatgatcggaattccacagaccggattacaggacctgttctcatg
ggggaagagaacaacattgttcacaaccagaaggtggagatccttcgaaagatgctacaa
cgagaaaaccagcaactacagctaatgaaagaagagggcagtcggaacccaactccacga
acccagaaagatattcaggaggccaaaaaacacatcacacaactacaggagcagctggac
aaggcaacagggaccagccaggacggggttcattcccccaaattgctgtcggacccgctg
cagattagggaagcggaggtggatggtgcagattccgaacagagtctccacacccggaac
aatagcagcggcacagacagaactcctcccaacagcaccgttagtgacctatttgccagt
ggctcgtccatattttcagagagtccctgccaaagagacgttccttctctgagtccaaag
gtggctcctaaagatgggaccaactcctacagtcaccctgacgccgatgagaaccaggat
acggattcccagtccagtgtcgggagcccctcggcccgtgtgggaccacagatcatcgga
gcagaggatgacgattttgacactgaacaggaacagattaatggtcagtgcagttgtttc
cagagcattgagttgctgaagtgtcgaccggcccacctggcagtgttcctccatcatgtg
gtatcccagtttgacccagcaccactgctctgctatctccatactgatctctacaagcag
accagttcaaaggagactcgccgtatcttcatggagtttcaccagttcttcctggaccga
ggggcgaatttgaagctgctggccccagaagctgtagcggttgacctggagaaacggcga
ccagagtttatccctgaggagttacaccgtcagcatattcaagccatgcaggagagcgtc
ctgcctgaggtacagagactgctggaggatttcaggcagaagcggagtatgggattgaca
ctggcagagagtgagctgtcaaagctggacagtgagcgcgtgcgggaccgcgtcgctctg
gagagggagcgtgccagtgctgaacagatcatctccaaaattgaggaagtgctgatcacg
ctgcagagctcagaggaggagaagagtttgacagtgcattatttaatagtaatgtacatg
aaacatctgggggtgaaactcaaagaatctcggaacctggagcacaaacgtgtgcggatg
agctttctcccaaaaatcaagcagagtataaagaaggagcgagagggagaagagaaggta
aagaaacgagtcttcccaagtatccttggacctcccagaagacccagtcggcaggacagt
ggagcaattggacgggccatggagcttcagaataaacgacacaccaagcagccatctcag
acgccactcagcccatccgactcttctgatgcttctaagttgagacagagcttcttgtcc
agtgatggaacagatacttcacacttgctatccaatcagatgtcaccacagagtgtaggg
tcctcctctcaggagagcagcagagagtgtgaatcaggttccactcctgtatcagcagtg
ctgaggcagccaggagagacgtcggcctccactgattccagtgattctgtaacacggatc
ccgaacttggtgtttgatttcccctcaccccctctagaacagctacaagaagaggaccga
gaaggtgggagactggaagtgctgccttatggggaggttcacagtgatgaggagggttac
aattttgaactggatggagatccaccaagctggcagcaactggtcagccgagagctcctt
tcagggcttaaagcccatgagatcaaacgacaagaagtgataaatgaactgttttacact
gaacgagctcatgttcgcatgttaaaagttctggatcaagtcttctatcaaaggatgtca
caagatggcatcctgccaccatccgatctgaagcacatcttctccaacctggatgaggtg
ttacagctgcatgttgatctgaatgaacagatgaaggcaatccgtaagaagagtgacaat
tctgttattgatcaaattggggagctgctttcctggttcagcagagcagaggaggggaaa
ctgaagaaagctgccgctaccttctgcagtaaccagccttttgctttggagctcatcaaa
tccaggcagaagaaggactcccgattccagaacttcatgctagaggcggagagtaaccca
ctatgccgacggctccagctgaaggatattatcccgacagagatgcagagactcaccaaa
tacccccttcttctggaaaacattgcaaagtactcagaacaagaggaagaaaaagacaag
gtgaaaaaggcagctgactgctgccggcaaatcctgaactttgtaaaccaggctgtgaag
gaagcagaaaacaagcagcatttggaagattatcagcgtcgcctggatctgtcttatctg
aagcagtcagagtcacccatgttagatgagttccggaatttagatctcaccaaaaggaag
atgatccatgaaggacctttgacctggaaggtgaaccgggacaagacgatagatctctac
actttgctcctagaggatatcctggtgcttctacagaaacaagatgaccgtctggttctg
aggtgtcacagtaagaaccttgctggcacagctgacaccaaacacatcttcagtcccgtc
atcaaactcagcaccgtactggtgcgtccagtcgccacaagtgagtataatgatgttttg
actttatgtaggtggcagtatctggttggacagcaagccggatcagggaaaaccaaacca
cacaataaggtcattgcgttgccacaacaagcacctccacctgctcacgaggaggaggaa
gaggaggagatgaacccagtggaacatcagaaaaataaccagaatgtgagcagagtgaca
acaggcattgaacagccgcaagaaaaagaacctgggctggaatctgcagaaaagctaaag
gcagaggaagaggagggacactgtttacagcaggaggtagcaggaaggaccgagtttgca
cagatgaggggaatggaggcgataactcaggaaagtgagaccatgttacactatcggaac
aaagtgcacgacttacctttattcccacaccagaaccgagcaacggaggcactgagaaac
ttggagttgttgaaggagttactgaaccatctctttatggtggatgaagatgtttttgat
agtttgaattctttccagcgcttttccattgagaacagggcactgttgcaccaagaatct
ctggacagcagccctctggggataccagagtatcaaccacataacctgagacctcaactc
accctggaggagatacctcagagaaatggcaaaccccaaactccctctgactctgcagct
caggatggggtgagggtgttatcatctggaggctcaaggacagaacatttgataagtagc
gatgtggaggagagtgaggacctgagtcctgtggcaggcccagaggaagggcaaggggag
attgtagctgatgaaggaggggaacagttctttgatgctccagaagcccacagtgatgta
aatctctccggatttaagaggatggaaaatccagaaaagcagaagggggaagaggaagaa
gtccaagctcagccaagagttcagggtaaatatttgatccttgatggatatggagagatc
caggaaagctgtacagatgatgatttggatccttcccaaatggcagaatgctctggccat
gtccccactactgactgtatggatcaatcccgaaattccatgggagaatccagatcagat
ccgaggaagttcctgtcttcgtctgattattttagtccccttcagagctccagaggtgat
tctcttccaggtatccgaaaactgctttgtgctccagacgtttggaaccagatcgagcag
cacatccatcagattcaggtggacctagagcacctaaaggagacagaggagcgctacagc
gaactttcccataggctggctgggtcggctccagaggaagaagataaaagttga
DBGET
integrated database retrieval system
