Latimeria chalumnae (coelacanth): 102353944
Help
Entry
102353944 CDS
T02913
Symbol
TTC6
Name
(RefSeq) tetratricopeptide repeat domain 6
KO
K24929
tetratricopeptide repeat protein 6
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
102353944 (TTC6)
Domain-containing proteins not elsewhere classified [BR:
lcm04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
102353944 (TTC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_9
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_19
ARM_TT21_N
TPR_BSK1_C
DUF3867
Rv1893
Motif
Other DBs
NCBI-GeneID:
102353944
NCBI-ProteinID:
XP_014340070
LinkDB
All DBs
Position
Un
AA seq
2039 aa
AA seq
DB search
MSQAQKQLQYVTNNPEEQLTKKEVEGSQKQSQQTDKLTKSCVDGTLTSHPLLQDSTHHKD
HSLPQVVSGLQKATKNRHIVPNKFGEVHKKSLNFSSIIESRKQEVPDFQVMIQGVNIAIQ
GNKELDTHEKQKRHVINEDKSATKEKCRNIVKSAITLMEGTTKPAPMFNRLDEPKGPKST
RCTAQSRAACIKTLGLKENHKNTIKHGIVVKKTGVKRVSYGKESSESKESSDSSSSDSDS
SETGYLTKKARIKKPQMLKTKSAVSSEAQHDSVSEVIFPVTREDSVRSICTTSVKSASEL
LEEARGIVKLDTSETYNRNAQQNQPESLTPTESSPVTVTAKSIDEVIASLRSAERTTARS
TTDEIIKELMEKALGKSTSSEDGDNLELESEPQAMTSEALTTEKISTDLQKPSLDPTGLE
QLYSEHIQEDYEEEHKQDFSTKLALKKQTESTQICYRTEQVLSSDEDKVETKETDVPSLH
MTYNQMVSEFPIYLEKNMDREEAMRILSLPEQVTYEEIMHVKGDTITIGERSAVAQQRWS
GEKPKQYYSFPTVLTTWTPTDKDQQNPTVHYLCTATPSHILPIDLQMASKIHHTSGKLSQ
TFKRILPAMEDLFHQEAMQVQLENSSGKTNTETPRVLNEGVPISEVHKTDLKDDIKILPP
HTSDSLTEWQKIAEYYVEGPRLLLLGKQVQFYVDAEKLFWTPAPPKFSFPVSFIQENVFP
KFESSIPGEEINCGIQTLSENNEGRELKCMDPQDRAALAKVLSRRHRSLSDIRSITTPFV
NVELQVNKIKKTLSAPSLSVNVAEAVLKLPSDFKTSMKELAILRQQLTQPMVQRKTENTP
QVKPQVMEEEISKSCEYVQYTQENDVMETSQAEPAKKAEINFICPKKTNKTKGMKKSRKT
AKIFKELNQPPRTLTRSESLPTIYLATKRKRRKLCQSHHPCSSSLPSLLNFEKLTEDWGG
IPENVDVREWVRGIWNAWFDEVFPDKSDTDKSISSSSSEIEVDEKEQSNLVQLIDFLNPV
VDENVATISELQSEISQLSELIKDPRQPTAFHYCRRGALKIKLGQIKTAKADLNTAICIE
PLLLDARWHRHLIYLLQDNDSEALEDLNFITKHKKNHADAYQSKAEIYRRRGDITMALLS
YSQAIKYNPQEDETYFRRAQLYESRNDMILAMEDYSQASQINPCRTDALIKHGFFCFENS
YWSGAIQNFTILIPQDPQNAEIRMYRGRALIKIGCYQEAIEDFSAAVHLDPNNWLAFYHR
GCLLRKVYPHKAMQDLSISVLINDSFNNLNAFLHRGILYTELNQLEEAVCDFRSVLNLDS
NAAVAYLNIGLISLRKQNYYEAIRQFGNALRVDPTYIRAYMCRARTYHTVHNLQKALKDL
TCAIHLQPTVQQLYILRGQYLYEMKKLDLASFCIQHAAEMNQALGSSPIQQAAVHSFLQN
HNKAIQCLVSAVRVKPVPSLFILLGKTQMKAKKSKEAVESFKKAIEILDPLDSLQSLSPE
AGEVFYLMGICYMDQVNLLQALGAFNNAVKICPNYADAYYQRGLCRMRLQQAKCIQDFNR
ALTINPKLFQAYLSRAAFYGIKEKYTKAILNCNEAIKIQPWSLRAYLYRGALKYYKKAYA
CAAEDFTSVTTIDKNCTLAYYNRAVCYHQLKESKKALKDYGVVLLLGSRKEIDLKVLINR
GLLYLELNDYYNALQDFVAATLKFPDDSKIYHALGICHHRLKQLKKAVKAFNHALKLDPI
LLDAYIGRGNVYMDYGHETGIKQAQRDFIRALHLNPLCLKARINLGYNFQVLGKFQRAWN
QFTIALDIDPKCQIAYEGRAVVSLQMGATFPAFHDITAALKLNVSAQLLTNRGVIQQLMG
GMHNAMKDYQAAISLNQNFALAYFNAANLYFYDKRFKQANKYYSKAIHLDPNNESAVMNR
GITCALLRNGHGALKDFEQAINLNPYSAHAYFNRGNFYSGLKQYHLAEKDYSQALVLQPN
DALLHKLRADVRGKLCLKEEAIADYKQAITIEEGSCFRNGNHGVESQSNVISEVDFRTL
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggcacagaagcagttgcagtatgttacaaataatcctgaagaacagttgaca
aagaaagaagttgagggttcacagaaacaatctcagcaaacagacaaactgaccaagagt
tgtgttgatggaacactgacttcccacccattattgcaagattcaacacatcataaagac
cacagtcttccacaagttgttagtggcctgcagaaagcaaccaaaaatagacacattgtt
cctaataaatttggagaggtacataaaaaaagtttgaatttttcctctataatagaaagt
cgtaaacaagaagttcctgactttcaagtaatgattcaaggagttaacatagctattcaa
ggtaacaaggaattggatactcatgaaaaacagaagagacatgtcatcaatgaagacaaa
agtgctacaaaagagaaatgcagaaacatagtgaaatctgcaataacactaatggaaggt
actacaaaaccagcacctatgttcaaccggctggatgaaccaaaagggcctaaatctaca
agatgtactgctcagtctagagctgcatgtatcaagacacttgggttaaaagaaaaccat
aaaaacactattaagcatggaattgttgttaaaaaaactggtgttaaaagagtgtcttat
ggtaaggaaagctctgaaagtaaggaaagtagtgactcaagctcttcagactctgattct
agtgaaactggctatttaacaaagaaggcaagaattaaaaaacctcaaatgttgaaaaca
aaaagtgcagtttcttcagaagctcaacatgattctgttagtgaggtgatatttccagtc
actagagaagacagtgtcaggtctatttgtacaacaagtgtgaagtctgcttcagagctg
ctggaagaggcgagaggaatagttaagctagacacttcagaaacgtacaacagaaatgcc
cagcagaaccaaccagaaagcttaactcctacagaaagtagtcccgttactgtgacagca
aaatctattgatgaagtaattgcttccctgcggtctgctgaacgtactactgctcggtct
accacagacgaaattattaaggagctcatggagaaagcacttggcaagagcaccagcagc
gaagatggggacaatttagaattagaaagtgaaccacaggcaatgacaagtgaagcatta
actactgagaagatatcaacggatcttcagaagccatccctagatccgacaggattagaa
cagttgtattcagaacatatccaagaagactatgaagaggaacacaaacaggacttttcc
actaagcttgctcttaaaaagcagacagaatcaacacaaatttgttacaggacagagcaa
gttttgtcatctgatgaagataaagtagaaaccaaagagacagatgtgccttctcttcat
atgacatataaccagatggtatccgagtttccaatctacttagaaaaaaacatggacaga
gaggaagctatgaggatcttgtcgttgcctgaacaggttacatatgaagagataatgcat
gtaaaaggagacactatcactattggtgaaaggagtgcagtggctcagcaaagatggtca
ggagaaaaaccaaaacagtattacagttttcccactgtattgaccacatggactccaaca
gacaaggaccaacagaatccaacagtccactacttatgcactgctacacctagtcatatt
ttacctattgatttacaaatggcttctaagatacatcatacatctggaaaattaagtcag
acctttaaaagaattttacctgcaatggaggatttattccaccaggaggcaatgcaagtc
cagttagaaaatagttctggtaaaacaaacactgaaacacccagagtccttaatgaagga
gttcctatttcagaagtccataagacagacttgaaggatgatattaaaattttaccacca
catacatctgacagtctgactgaatggcagaaaatagcagagtattatgtagaaggccca
aggctactacttttaggaaagcaagttcagttttatgttgatgcagaaaaattgttctgg
acaccagcacctccaaagttctcttttcctgtttctttcatacaagaaaatgtatttcct
aagtttgagagtagcattcctggagaagaaattaattgtggcattcaaacattaagtgag
aacaatgaaggtcgggaactgaagtgcatggatccacaagacagagctgctttggcaaaa
gtattatccagaaggcatagatctttatcagatataaggtccattacaactccgtttgta
aacgttgagctacaggtcaataagattaaaaaaacactatctgcacctagtctgtctgtc
aatgtggctgaggcagtgctaaagttaccaagtgatttcaaaaccagcatgaaggaactg
gcgatattaaggcagcagttaactcaacctatggttcaaagaaaaactgaaaacaccccc
caagtgaaacctcaagtaatggaggaagaaatttcaaaaagttgtgaatatgttcagtat
acacaagaaaatgatgtcatggaaacctcacaagctgaacctgcaaagaaagctgagatt
aattttatttgtcctaagaagacaaataaaaccaagggaatgaaaaaaagcagaaaaaca
gccaagatttttaaggaactaaatcagcctccaaggactctcacaaggagtgagtccttg
cctacaatttatttagccaccaaacgaaaacgcagaaagctttgccagtcccatcaccct
tgcagctctagtctgccatcattgctgaactttgaaaaacttacagaagactggggtgga
attcctgaaaatgttgatgttcgagagtgggtcaggggcatctggaatgcatggtttgat
gaggtcttcccagataaaagtgatactgataaaagtatatcatctagcagttcagaaata
gaagtcgatgaaaaagagcaatcaaatctagtgcaactaattgatttcttgaatcctgtt
gttgatgaaaatgtagctaccataagtgaactgcagtctgaaatctctcagctgagtgaa
ctaattaaggacccaagacaacccactgcttttcactattgcagacgtggagctttgaaa
ataaagttagggcaaataaagacggccaaggctgacctaaacacagcaatctgtatagaa
ccactattacttgatgcccgttggcacagacatttgatttatttattgcaagacaatgat
tctgaagccttggaggacctcaattttataacaaagcacaagaaaaaccatgcagatgct
taccagtcaaaagctgaaatttacagaagaaggggggatattaccatggcgctcctaagt
tacagtcaggcaattaaatataaccctcaagaggatgaaacctactttaggagagctcag
ctgtacgagtcaagaaatgatatgattttggcaatggaagattattctcaagcttcccaa
atcaacccatgcagaacagatgcattaataaaacatggattcttctgttttgaaaattcg
tactggagtggagctattcagaactttactattttgattcctcaagatccccaaaatgca
gaaataaggatgtaccgagggagggctcttattaaaattggatgctaccaagaagctatt
gaagatttctctgcagcagtgcacttggatcccaataattggctagctttttatcataga
gggtgtctgctacggaaggtttacccacacaaagcaatgcaggatttaagtatttctgta
cttatcaatgacagctttaataatttgaatgcatttttacatcgtgggatcctgtatact
gaactgaatcagttagaagaagcagtttgtgactttagaagtgtacttaatcttgacagc
aatgctgctgtggcttacctgaacattggactgatctccttaagaaagcaaaactattac
gaagctattcgacaatttggtaatgctctcagagttgatccaacatatataagagcttat
atgtgtcgagctcggacatatcatacggtacataacttacagaaggcattgaaggattta
acttgtgctatacatcttcagccaactgtccaacagttgtacattttgagagggcagtat
ctctatgagatgaagaaactagatctcgcaagtttttgtatccagcacgcagcagaaatg
aatcaagctcttggttcatctcccatccagcaagcagctgttcactcctttcttcagaac
cacaataaagctatacagtgcttagtttctgctgtaagagttaagcctgtaccatctttg
tttattctactgggaaagactcagatgaaagctaagaaaagtaaggaagcagtggagagc
tttaaaaaagctatagaaatactcgatcctttggattcacttcagtcattatcaccagag
gcaggagaagtattttacttaatgggcatatgctacatggaccaagtcaacttgttgcag
gccttgggagcttttaacaatgcagtaaaaatttgtcccaactatgctgatgcttactac
cagcgagggctctgcagaatgcgccttcagcaagctaaatgtattcaagactttaatcga
gcacttaccatcaaccccaaactgtttcaggcatatttaagtcgtgctgctttctatggt
ataaaagaaaaatacacaaaggccattctcaactgtaatgaagctattaagattcaacca
tggagtctgagagcctatttgtacagaggtgctttaaaatattataagaaggcatatgcc
tgtgcagctgaagacttcactagcgtcaccaccattgacaaaaactgtactttggcatac
tataacagagcagtctgctaccaccaattaaaggaatctaagaaggccttaaaagattat
ggggtagttctacttctgggcagcagaaaagaaattgatctgaaagtgctaattaaccgt
ggacttctctatctggaattgaatgactactataatgcattgcaggattttgttgctgca
acactgaaattccctgatgattcaaagatttatcatgcattagggatatgccatcatagg
cttaagcagttgaaaaaagctgtgaaggctttcaaccatgcacttaaactagatcctatt
cttctggatgcctatattggacgggggaatgtgtacatggactatggtcatgaaactggc
atcaaacaggcacaaagagacttcataagagccctgcacctgaaccctttgtgtctcaaa
gctaggatcaacttgggatacaactttcaggtattgggaaagtttcagagagcttggaat
caatttacaattgctcttgatattgatccaaaatgccagattgcatatgaaggaagagct
gtagtcagtcttcagatgggtgcaacctttcctgcattccatgacattactgctgcacta
aagcttaatgtctctgcacagctgcttacaaatcgtggagttattcaacagctcatggga
ggcatgcataatgctatgaaggattaccaagcagccatatcacttaaccagaactttgca
ttggcctattttaatgctgctaacctatacttctatgacaagcgctttaagcaggccaat
aaatactacagtaaagcaatacatcttgatccaaacaatgaatctgcagtgatgaatcgt
ggtatcacatgtgcactgcttagaaatggtcatggagcactcaaagattttgaacaagcg
attaatctcaatccttactcagcacatgcatactttaacaggggcaacttctatagtggc
cttaagcaatatcatctggcagagaaggattattcacaagcgcttgttctccagccaaat
gatgccctgttgcacaaacttcgagctgacgtccggggaaaactgtgcttaaaggaagaa
gctattgctgattataagcaagctataactattgaggaaggatcatgctttcggaatgga
aaccatggtgtggaatcccagagcaacgtcatctctgaagttgatttcagaacactttaa
DBGET
integrated database retrieval system
