Latimeria chalumnae (coelacanth): 102354093
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Entry
102354093 CDS
T02913
Symbol
PTBP2
Name
(RefSeq) polypyrimidine tract binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102354093 (PTBP2)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102354093 (PTBP2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
102354093
NCBI-ProteinID:
XP_014349789
LinkDB
All DBs
Position
Un
AA seq
565 aa
AA seq
DB search
MDGIVTDVAVGLKRGSDELLSASVLNGPNSNMSSIVVTANGNDNKKFKGDDRMDGTTSRV
LHIRKLPSEVNETEVISLGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYTAVTPH
LRNQPIYIQYSNHKELKTDITLNQRAQAVLQAVTAVQAVNTPLSGSTVSESALTPAQSPV
LRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYADPMNAQQARLALDG
QNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPALDPTLATAFTKETSL
LGTPAGIVPNPYSGAAGFPPSLSFAQTAGLPIAAVPGALSPLAIPSAAAAAAAAAAAGRV
ALPGISAGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQ
AQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFSNSPLHRFKKPGSKNF
QNIFPPSATLHLSNIPPSVTEDDLRTLFANTGGTVKAFKFFQRDHKMALLQMGTVEEAIQ
ALIDLHNYNLGENHHLRVSFSKSTI
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgttactgatgttgcagttggcttaaagagaggatctgacgaacttctt
tctgccagtgtactaaacggtccaaactctaatatgagcagcattgtagttactgctaat
ggaaatgataacaagaaattcaaaggagatgatagaatggatggtacaacttcccgtgtc
cttcatattaggaagctgcccagtgaagtgaatgaaactgaagtcatttctcttggttta
ccctttgggaaagtgacaaatatcctaatgctgaaaggaaaaaaccaggcttttttagaa
ctggctactgaagaagcagctattaccatggttaattattatactgctgtaactcctcac
ctccgaaaccagccaatctacatccagtattcaaatcataaggagctcaaaactgatatt
actcttaatcagcgggcacaagctgtccttcaggctgtaacagctgtacaagcagtcaat
actccactcagtgggagtacagtcagtgagagtgcattaacaccagctcaaagcccagtg
ctgagaatcattattgacaatatgtattatccagtgacgcttgatgtccttcaccagata
ttttccaaatttggagctgtactgaagattattacatttacaaaaaacaaccagtttcaa
gctttgcttcaatatgctgatcctatgaatgcacaacaagcaagactggcccttgatggt
cagaacatttacaatgcttgctgtactctgcgcattgacttttccaaactggtaaaccta
aatgtgaaatacaacaatgacaaaagcagggattatactcgaccagaacttcctgctggg
gatgggcaaccagctttggatcctactcttgctacagcattcactaaagagacttctctt
ctcggtactccagcaggaattgtgccaaatccatatagtggagcagctgggtttccacct
tctctaagttttgcacaaacagcagggcttcccattgcagctgttccaggagctctgagt
cccttggccattccaagtgctgctgctgctgctgcagctgctgctgctgctggtcgtgtg
gctttacctggtatatcagctggtggcaatacagtacttctggttagcaatttaaatgaa
gagatggttacgccccaaagtctgtttaccctcttcggtgtttatggcgatgtgcaacgt
gtgaagattttgtacaataagaaagacagcgctcttatacagatggctgatggaaaccag
gcacagcttgcaatgagccatcttaatggacaaaaaatgtatggaaagatcattcgtgtc
accctttccaaacatcagacagtgcaactacctcgagaggggcttgatgaccaaggacta
actaaggatttcagtaattcaccgttgcaccgttttaagaagccaggctcaaaaaatttt
cagaacatatttcctccttctgctactcttcacctgtctaatattccaccttctgtaaca
gaggatgatctccgaacgctgtttgctaacactggtggcactgtgaaagctttcaagttt
tttcaaagagatcacaagatggctcttcttcagatgggaacagtagaagaggcaatccaa
gctttaattgatcttcacaactacaaccttggagaaaatcaccacctgagggtttccttc
tcaaaatcaacaatttaa
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