Latimeria chalumnae (coelacanth): 102354114
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Entry
102354114 CDS
T02913
Symbol
YBX1
Name
(RefSeq) Y-box binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102354114 (YBX1)
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102354114 (YBX1)
03041 Spliceosome [BR:
lcm03041
]
102354114 (YBX1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
102354114 (YBX1)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
102354114 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
102354114 (YBX1)
Spliceosome [BR:
lcm03041
]
Common components
Common spliceosomal components
General mRNP proteins
102354114 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
102354114
NCBI-ProteinID:
XP_005988757
Ensembl:
ENSLACG00000018135
UniProt:
H3BFG7
LinkDB
All DBs
Position
Un
AA seq
303 aa
AA seq
DB search
MSSEAETQPQSPAAESKPSPAAAANAGEKKVIATKVLGTVKWFNVRNGYGFINRNDTKED
VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRN
TYRRYPRRRGPPRNYQQNYQTVEGGDKSEGTESAEGENKPQERRPYRRRRYPPYYMRRPY
WRRLQYSNPPPPGELVEGDENNQGANEQGTRPPRPNMYRGYRPRFRRGPPRPRQPREGDN
EEDKENQGDGAQNQPRPRQYRRNFNYRRRRPQNPKPQDGKENKAAEPSAENTSAPEAEQG
GAE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgaaacacagccgcagtctcccgccgcggagagcaaacctagtccg
gcagcggcggctaacgcgggggaaaagaaggtcatcgcaacgaaagtcttgggaacagtg
aaatggttcaacgttagaaatggctacggattcatcaacaggaatgacaccaaggaagat
gtgtttgtacaccagactgccattaagaagaataatcctcggaagtatctgcgcagtgtg
ggggatggagaaactgtggagtttgatgtggtggaaggagaaaagggtgcagaggcagcc
aatgtcactggtcctggtggagttccagttcaaggaagcaagtatgcagcagaccgcaac
acatataggcgctatccccgtcgcaggggtcctcctcgcaattaccagcagaattaccaa
actgtagaaggtggtgataagagcgagggcacagagagtgcagagggtgagaataagccc
caggaacgtcgcccataccgtaggagacgttacccaccttactacatgcgtagaccctat
tggcgccgcctgcagtactccaacccaccacctccaggagagttagttgagggtgatgaa
aataaccaaggtgctaacgaacaaggcactaggccaccaagaccgaacatgtaccgaggt
tacagaccacggttccgcaggggaccccctcgtccaagacaacctagggagggagacaat
gaagaggataaggagaatcagggtgatggggcccagaatcaaccacgcccacgccagtac
cgccgcaacttcaactatcggcgcaggcgccctcagaaccctaaaccacaagatggcaaa
gagaacaaggcagccgaaccatcagctgaaaacacgtctgctcccgaggccgagcagggt
ggggctgagtaa
DBGET
integrated database retrieval system