KEGG   Latimeria chalumnae (coelacanth): 102354142
Entry
102354142         CDS       T02913                                 
Name
(RefSeq) protein NLRC5-like
  KO
K22615  NLR family CARD domain containing 5
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:lcm04054]
    102354142
Pattern recognition receptors [BR:lcm04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   102354142
SSDB
Motif
Pfam: NACHT NLRC4_HD2 NPHP3_N NOD2_WH AAA AAA_22 AAA_16 SLFN-g3_helicase NB-ARC AAA_30 nSTAND3 AAA_7 Roc AAA_19 ResIII Pox_A32 ORC-CDC6-like ATPase_2 AAA_14 ABC_tran TsaE
Other DBs
NCBI-GeneID: 102354142
NCBI-ProteinID: XP_006014120
LinkDB
Position
Un
AA seq 541 aa
YGYTLCLGSIKFKKKPLAQRRRSTPGTPAEAIVTKQPRLGKSTKLALQSGSGSTSAVLLL
EEAKPETGIPNPRLEQLDFSELLAFAEKYKHLLEKTSLRKYENKEGGLNQVTLNQMFINL
MIKDGNISKLKDRIDKIRDDVLTLQEDEEVFGSVVKVSNLFWSTPTSHSKVIVLLGKAGT
GKTMLMHRIFREWANGAYNQFQFVFLFEFRQLNLIEQTLSLKQLLFHLFLQPEENPSAVF
QYITKQSQKILILFDGLDEFRDKTSVNSSNMYDDPHKPLTIVELFSSLYNGKLLKGCTLV
VTCRTKDVLELPLHVVDQVGEVLGFDEKRVKEYASQFFCESCYKEQAIAHLLNNRKILSM
CYVPALCSIVCVSLEYLLARHLPGRELPQTMTQFYIKMLTAFLSKKSKAAIADNEETLIN
KHRLEIRGLCELALKGLEEGKIVFYERDASEAVKAFAASNGLLTVFDIKKIDGMKEAGYA
LVHLSLQEFFAALFMMISCVNDGVLKKKFILKSKWTSKNDPKTEFTDSFHIFLAGLSSKE
C
NT seq 1626 nt   +upstreamnt  +downstreamnt
gctatggttacactttgtgtctaggaagtattaagtttaaaaagaaaccgttggctcaaa
gacgtcgctctacacctggcacacctgctgaagctatagtgactaaacagccacgactag
gcaagagtacaaaattagcactgcagtcaggaagtggctccacatctgctgttttattat
tggaagaagcaaagcctgaaactgggattcctaatccaagactggaacaattggatttta
gcgagctgttggcatttgctgaaaagtacaagcacttactggagaaaacatcactgcgca
agtatgaaaacaaagagggagggctcaaccaagtaacactaaaccagatgtttataaacc
taatgatcaaggatggaaacatttccaagttaaaagacagaattgataaaattagagatg
atgtattgaccttgcaagaggatgaagaggttttcggctctgttgtcaaagtatctaact
tattttggagtactcctacctcacattccaaagttatcgtcttgctaggaaaagctggta
ctggaaagacaatgttgatgcatagaatattccgtgagtgggccaatggagcttataacc
aatttcagtttgtttttctgtttgaatttaggcagctaaatttaatagaacaaactttat
cattaaagcagcttctctttcacctgtttcttcaacctgaagaaaaccccagtgcagtgt
ttcagtatataactaagcagtcacaaaagattttaattttgtttgatgggctggatgagt
ttagagacaagacgtcagtcaattcttccaacatgtatgatgatccccacaaacccttaa
cgatagttgaactgttttcaagcctctacaatggaaagctcttgaaaggatgcacattgg
tggttacctgcaggactaaggatgtccttgaacttcctttgcatgtggtagaccaggtgg
gggaagtcttggggtttgatgaaaaaagggttaaggaatatgcaagccagtttttctgtg
aaagctgctacaaggagcaggcaatagctcacctcctgaataacagaaaaattttaagca
tgtgctatgttcctgcattatgttctatagtctgtgtgagtctagagtacctgctggcaa
gacacttacctggtagagaacttccacagacaatgactcagttttatattaaaatgctca
cagccttcttaagcaaaaagagcaaggctgccattgctgataacgaggagaccctgataa
acaaacacagactggaaatccgagggctctgtgaacttgcactgaaagggcttgaagaag
gaaagattgtattttatgaaagggatgcctctgaagctgtcaaagcatttgctgcttcta
atggtttgctcactgtatttgacataaagaagattgatggaatgaaagaagctggctatg
ctctggtacatttgagcttgcaggagttttttgcagcactctttatgatgataagttgtg
tgaatgatggtgttctaaagaagaaatttattctgaaatcaaaatggacttcaaagaatg
accctaaaactgagtttacagacagctttcacatatttttggctggcctgtcatcaaagg
agtgta

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