Latimeria chalumnae (coelacanth): 102354142
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Entry
102354142 CDS
T02913
Name
(RefSeq) protein NLRC5-like
KO
K22615
NLR family CARD domain containing 5
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcm04054
]
102354142
Pattern recognition receptors [BR:
lcm04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102354142
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Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
NPHP3_N
NOD2_WH
AAA
AAA_22
AAA_16
SLFN-g3_helicase
NB-ARC
AAA_30
nSTAND3
AAA_7
Roc
AAA_19
ResIII
Pox_A32
ORC-CDC6-like
ATPase_2
AAA_14
ABC_tran
TsaE
Motif
Other DBs
NCBI-GeneID:
102354142
NCBI-ProteinID:
XP_006014120
LinkDB
All DBs
Position
Un
AA seq
541 aa
AA seq
DB search
YGYTLCLGSIKFKKKPLAQRRRSTPGTPAEAIVTKQPRLGKSTKLALQSGSGSTSAVLLL
EEAKPETGIPNPRLEQLDFSELLAFAEKYKHLLEKTSLRKYENKEGGLNQVTLNQMFINL
MIKDGNISKLKDRIDKIRDDVLTLQEDEEVFGSVVKVSNLFWSTPTSHSKVIVLLGKAGT
GKTMLMHRIFREWANGAYNQFQFVFLFEFRQLNLIEQTLSLKQLLFHLFLQPEENPSAVF
QYITKQSQKILILFDGLDEFRDKTSVNSSNMYDDPHKPLTIVELFSSLYNGKLLKGCTLV
VTCRTKDVLELPLHVVDQVGEVLGFDEKRVKEYASQFFCESCYKEQAIAHLLNNRKILSM
CYVPALCSIVCVSLEYLLARHLPGRELPQTMTQFYIKMLTAFLSKKSKAAIADNEETLIN
KHRLEIRGLCELALKGLEEGKIVFYERDASEAVKAFAASNGLLTVFDIKKIDGMKEAGYA
LVHLSLQEFFAALFMMISCVNDGVLKKKFILKSKWTSKNDPKTEFTDSFHIFLAGLSSKE
C
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
gctatggttacactttgtgtctaggaagtattaagtttaaaaagaaaccgttggctcaaa
gacgtcgctctacacctggcacacctgctgaagctatagtgactaaacagccacgactag
gcaagagtacaaaattagcactgcagtcaggaagtggctccacatctgctgttttattat
tggaagaagcaaagcctgaaactgggattcctaatccaagactggaacaattggatttta
gcgagctgttggcatttgctgaaaagtacaagcacttactggagaaaacatcactgcgca
agtatgaaaacaaagagggagggctcaaccaagtaacactaaaccagatgtttataaacc
taatgatcaaggatggaaacatttccaagttaaaagacagaattgataaaattagagatg
atgtattgaccttgcaagaggatgaagaggttttcggctctgttgtcaaagtatctaact
tattttggagtactcctacctcacattccaaagttatcgtcttgctaggaaaagctggta
ctggaaagacaatgttgatgcatagaatattccgtgagtgggccaatggagcttataacc
aatttcagtttgtttttctgtttgaatttaggcagctaaatttaatagaacaaactttat
cattaaagcagcttctctttcacctgtttcttcaacctgaagaaaaccccagtgcagtgt
ttcagtatataactaagcagtcacaaaagattttaattttgtttgatgggctggatgagt
ttagagacaagacgtcagtcaattcttccaacatgtatgatgatccccacaaacccttaa
cgatagttgaactgttttcaagcctctacaatggaaagctcttgaaaggatgcacattgg
tggttacctgcaggactaaggatgtccttgaacttcctttgcatgtggtagaccaggtgg
gggaagtcttggggtttgatgaaaaaagggttaaggaatatgcaagccagtttttctgtg
aaagctgctacaaggagcaggcaatagctcacctcctgaataacagaaaaattttaagca
tgtgctatgttcctgcattatgttctatagtctgtgtgagtctagagtacctgctggcaa
gacacttacctggtagagaacttccacagacaatgactcagttttatattaaaatgctca
cagccttcttaagcaaaaagagcaaggctgccattgctgataacgaggagaccctgataa
acaaacacagactggaaatccgagggctctgtgaacttgcactgaaagggcttgaagaag
gaaagattgtattttatgaaagggatgcctctgaagctgtcaaagcatttgctgcttcta
atggtttgctcactgtatttgacataaagaagattgatggaatgaaagaagctggctatg
ctctggtacatttgagcttgcaggagttttttgcagcactctttatgatgataagttgtg
tgaatgatggtgttctaaagaagaaatttattctgaaatcaaaatggacttcaaagaatg
accctaaaactgagtttacagacagctttcacatatttttggctggcctgtcatcaaagg
agtgta
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