Latimeria chalumnae (coelacanth): 102354165
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Entry
102354165 CDS
T02913
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04080
Neuroactive ligand-receptor interaction
lcm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102354165
04082 Neuroactive ligand signaling
102354165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102354165
Ion channels [BR:
lcm04040
]
Ligand-gated channels
GABA-A
102354165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
102354165
NCBI-ProteinID:
XP_005999897
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All DBs
Position
Un
AA seq
497 aa
AA seq
DB search
MGHSYVPSTIEGSQHRFPQEWVEDWALFFGRDYRFLASSVAVPSEEGHINSPPVCLGHSQ
RFMKVPSVEAQVRNGEILPPTVQKIMKGYNKYLRPFFDNGPVTIGMSLDIASIDKISEIN
MDYTATIFLRQRWTDERLCFDGNKSLSLDGRLVEMLWVPDTFIVDSKKSFLHDITVENRL
IRIYPNGTVLYAIRITTTVACNMDLTKYPMDKQLCTLQLESWGYNINHVTFYWTRGNDSV
CGLDTLHLAQFTVEDYYTTVSEAVYETGCYPKLIFHFELKRNILYFILETYVPSILLVTL
SWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFG
ALLEYAVAHFCTLHQIGMEEPTKQVIWNDKKASMIFGRKLGFSKILMPQGFSVKTALDGK
ENAVALKDITHNSSDTKPRMDRQDKSNKCIITVKRLLCIFKFCQVENPHHIDNYARLSFP
LSFIVVNLLYWVYYLCF
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggggcactcttatgtgccaagcactatagaaggatcccagcatagatttcctcaggag
tgggtagaggactgggcattattctttggacgtgactacaggtttcttgccagtagtgta
gctgtgccatctgaggaaggacatataaatagccccccagtatgtctgggacactcacag
agattcatgaaagttcctagtgttgaagcacaagtaagaaatggagaaattcttccacca
acagtccaaaaaatcatgaagggatataataaatacctccgacctttctttgacaatggg
cctgttaccataggaatgagccttgatattgcaagcatcgataaaatatcagaaataaat
atggactacactgctacaatattccttagacaaaggtggactgatgagcggttgtgcttt
gatgggaacaagagtttaagtttagatggacggcttgtagaaatgctttgggtgccagat
acttttatagtggattcaaagaagtcttttcttcatgacatcactgttgaaaatcgtcta
ataagaatttatccaaatggaacagtcctttatgctattaggattactacaactgttgct
tgtaatatggatttaacaaagtaccccatggataagcagctctgtactttgcaactggaa
agctggggctacaatatcaatcatgtaacgttttattggactagaggaaatgactctgtt
tgtggcttggacacacttcacttggctcaattcacagtagaagattattatacaactgta
tcagaagcagtttatgaaacaggttgctacccaaagttgatatttcattttgaactgaag
agaaacatcctgtattttatactagagacatacgtaccttccatcctcttggttacactg
tcctgggtatctttttggatcagccagtcatcagttccagcaagaatctgtataggagtg
acaactgttcttacaatgacaacactaatgatgggagcaaggacatctcttcctaatgca
aactgcttcataaaggctattgatgtataccttggcatatgttttagttttatctttgga
gctctactagaatatgctgtagctcatttctgcacgctccatcaaattggtatggaggag
cctacaaagcaagttatttggaatgacaagaaagcttccatgatttttggaagaaagcta
ggattttcaaaaattcttatgcctcagggattttctgttaaaactgccttagatggtaaa
gaaaatgcagtggccttaaaggacatcactcataatagtagtgatacaaagccaaggatg
gacagacaggataaatctaataaatgcattataaccgttaaaaggctactttgtatcttc
aaattttgccaagttgaaaatcctcaccatattgacaattatgccagactgtctttcccg
ttatcatttattgtagtaaacttactatactgggtgtattacttatgtttctag
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