Latimeria chalumnae (coelacanth): 102354172
Help
Entry
102354172 CDS
T02913
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes 1A
KO
K06636
structural maintenance of chromosome 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04110
Cell cycle
lcm04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102354172 (SMC1A)
04114 Oocyte meiosis
102354172 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
102354172 (SMC1A)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102354172 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
102354172 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102354172
NCBI-ProteinID:
XP_006002431
Ensembl:
ENSLACG00000000861
UniProt:
H2ZU92
LinkDB
All DBs
Position
Un
AA seq
1233 aa
AA seq
DB search
MGYLTLIEIENFKSYKGKQIIGPFRKFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LKDLIHGAPVGKPAANRAYVSMVYTEENGEERTFTRAIIGSSSEYRINSKVVQLQEYSDE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDELARAQVHLQLFRLYHNEAEIEKLSK
ELGTKNKEIDKDKKRMDKVEDELKDKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKQYKKRKADMDELEKEVGAVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQESEKFNRDQKADQDRLDLEERKKIETEAK
IKQKLREIEENQKRIEKLEEYISTSKQSLEEQKKLETELTEEVEMAKRRMDEINMELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKFQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPQQIKKALQYACGNALVCENVEDARKIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKELKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDYEKNQLKEDLEKVQMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVSDKNHDMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPFIQGSMDDISQEEGASQGD
ESVGSSSQRTSNIYAREALIEIDYSDLSEDLKDALADDEIKHEMNNLQQKVNEHQSILQR
ISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVAT
NIDEIYKSLSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALA
LLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSVSNFQAIVISLKEEFYTKAES
LIGVYPEQGDCVISKVLTFDLTKYPEANPNPNE
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctaacgctgatcgagatcgagaacttcaaatcgtacaaagggaagcagata
atcggtcccttccgcaaattcaccgctattatcggccccaatggatcaggcaagtcgaac
cttatggatgccatcagctttgtgcttggtgagaagacaagtaacctgcgtgtgaaaacg
ctgaaggatctaatccatggcgcgcctgttggaaaacccgctgccaaccgggcatacgtc
agcatggtgtatacggaggagaatggagaggagaggaccttcacacgtgccattatcggt
tcctcctcggagtacaggattaacagtaaagtggtgcagctgcaggagtacagcgacgag
ctggagaaactggggatcctgatcaaggcccgcaacttcctggtgttccagggcgcggtg
gaatcaattgccatgaagaacccgaaagagaggacggccctgtttgaagagatcagccgc
tcaggcgagctggctcaggagtacgacaaaaggaagaaggagatggtaaaggctgaggag
gacacgcagttcaactaccaccgcaagaagaacattgctgctgagaggaaggaggccaag
caggagaaagaggaggcggagcgctaccagcgtctgaaagacgaactggcccgtgcccag
gtccacctgcagctcttcaggctttaccacaacgaggcggagattgagaagctgagcaag
gagctgggcaccaagaacaaggagatcgataaggacaagaaacggatggacaaggtggag
gatgagctgaaggacaagaagaaggaactgggcaagatgatgagagagcagcagcagatt
gagaaggagatcaaggaaaaggactcggagttgaatcagaaacggccccagtacatcaaa
gccaaggagaacacctcccacaagatcaagaagctggaagcagccaagaagtctttgcag
aacgcccagaagcagtacaagaagaggaaggcggacatggatgagctggagaaggaggtg
ggggcggtggagaaggcgcggcaggagtttgaggagcggatggaggaggagagccagagt
cagggcagggacctcaccttggaggaaaaccaggtgaaaaagtaccaccggctgaaggaa
gaagccagtaagcgggcggccactttggctcaggagtcagagaagttcaatcgggaccag
aaagcggatcaagatcgcctggacctggaggagcggaagaaaattgagacggaggctaaa
attaagcagaaactgcgggagattgaagagaaccagaagcggatagagaagctggaagaa
tacatctccaccagcaagcagtccctggaggaacagaagaagctggagacggagctgact
gaagaagtagagatggccaagaggcggatggatgagatcaatatggagttgaaccaggtg
atggaacagctgggggatgccaggatcgaccggcaggagagcagccgccagcagcggaaa
gcagagatcatggagagcatcaaacgtctctacccagggtctgtgtacggccgcctcatt
gacctttgccagcccacccagaagaagtttcagattgctgtgaccaaggtgctgggaaag
aacatggatgccattattgtggactctgagaagactggtcgggactgtatccaatacatc
aaggagcagaggggtgagccggagaccttcctccccttggactacttggaggtgaagcca
acagatgagaaactgcgagagctgaggggagcaaaactggtgattgatgtgatccgctac
gagccgcagcagattaagaaggcgctgcagtacgcctgcggcaatgctctggtgtgcgag
aatgtggaggatgcccggaagatcgcttttggagggcaccagagacacaagacagtggcc
ctggacgggacattgttccagaagtcgggggtgatttctggaggtgccagtgatctgaag
gcaaaggcaaggcgttgggatgagaaagcggtggacaagctgaaggagaagaaggagcgg
cttactgatgaactgaaggaacaaatgaaagcgaagaggaaggaggcggaattgagacag
gtgcagtctcaggctcatggcctgcagatgagactgaaatattcccagagtgacctggag
cagacgaaaacccgacacctcgcactcaatttacaggagaaatccaaactggagagtgag
ctggcgaactttgggccacgtatcaacgacataaaaaggatcattcagtcgcgagagcgg
gagatgaaggagttgaaggaaaagatgaaccaggtggaggatgaggtgtttgaagagttc
tgtcgagagattggagtgcggaacatccgagagttcgaggaggagaaagtcaagcggcag
aatgagattgcaaagaaaagactggagtttgagaatcagaagacacggctgggcattcag
ttggactatgagaagaaccagctgaaagaggacttggagaaggtgcagatgtgggagcag
acggtcaagaaggacgagaacgagattgagaagctgaaaaaggaggagcagaggcacatg
aagataattgacgagaccatggcgcaactgcaggacctgaaaaaccagcatctcgccaag
aaatcggaggtgagcgacaagaaccacgacatggaggagattcgcaagaaattgggagga
gcaaacaaggagatgacccacttgcagaaagaagtgacagccattgagacgaagctggag
cagaagcgcagtgaccgacacaacctcctgcaggcctgtaaaatgcaggatatcaagctg
cccttcatccaggggagcatggatgacatcagccaggaggagggggcgtctcagggtgat
gagtctgttggcagcagctcccagaggacatccaacatttacgcccgtgaggccctgatt
gagattgactacagcgatctttctgaagacctgaaggatgctctcgctgatgatgaaatc
aaacatgagatgaacaacctgcagcagaaggtgaacgagcatcagagcatcctccagagg
atttcagcacccaacatgaaggcaatggagaaactggagagtgtgagggacaagtttcag
gagacctcggacgagttcgaggccgcaaggaaacgggcaaaaaaagccaagcaggctttt
gaacagataaagaaggagaggttcgaccgcttcaatgcctgctttgaatcggtggccacc
aacattgatgagatctacaaatcactctccaggaacagcagtgctcaggctttcctgggt
ccggagaatcccgaggagccctatttagacgggatcaattacaactgcgtggcccctggg
aagagattccggccgatggataacctgtctggaggagagaagactgtggctgctctggct
ttgctctttgctattcatagctacaaaccagcccccttctttgttctggatgagattgac
gctgccctcgacaacaccaacatcggaaaggtggcaaactacatcaaagagcagtctgtg
tccaacttccaggccatcgtcatttccttgaaggaagagttctacacaaaggccgaaagt
ctcatcggtgtttatcctgagcaaggagactgtgtcatcagcaaggtcctgacctttgac
cttaccaagtatccagaagccaatccaaaccccaatgagtag
DBGET
integrated database retrieval system
