Latimeria chalumnae (coelacanth): 102354195
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Entry
102354195 CDS
T02913
Symbol
RAG1
Name
(RefSeq) recombination activating 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
102354195 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102354195 (RAG1)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102354195 (RAG1)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102354195 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-C3HC4_3
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
102354195
NCBI-ProteinID:
XP_005987022
LinkDB
All DBs
Position
Un
AA seq
1058 aa
AA seq
DB search
MEVPLVSMPLRNMPAELHHPYKKFSEWKFKLFRVRSFEKTDPVEVETSNKENKPSHAAPL
EATPLVIQHKESAALENIPPAGVSILKAKITESNQLKPIFVDNNQLEPNDMKLQTHIANL
QRLCRLCGDCLKTDGRNMSFAIQGPVDKSTAVLLRKMRVKISSWPDLILKVFSTDVRGDI
KSVHPTHFCHTCWTVIRKWISDPNGQEMGVLADRVVGWLPHSLFCKICDTGNRAVKRKNQ
QQNPQFAKRLKIGNSKRLRNKKQTVQSKSKKNALIKKIANCKKIHLSTKFLAAEYPVDFV
KSMSCQICEHILADPVQSPCKHLFCRTCIAKCTRVLGNYCPACKHPCFPTDLVSPVKVFL
NILNSLMVKCPAKECDEQVRLEEYSSHSQSHKEVKLGDAYTPANKGGRPRQHLLSLTRRA
QKHRLRELKLQVRAFADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAVMQGRGSALH
PAVCLAIRVNTFLSCSQYHKMYRTVKATTGKQIFQPLHSLRNAEKALLPGFHPFEWQPPL
KNVSSTTEVGIIDGMSGMTQFVDEYPLDTISKRFRYDAALVSALKDLEEELLKGLIEEDL
EDYLSGPFTVIIKESCDGMGDVSEKHGSGPAVPEKAVRYSFTIMTISVANSHNENVTIFE
EGKPNSELCCKPLCLMLADESDHETLTAILGPVIAEREAMKNSELFLEMGGILRSFKFIF
RGTGYDEKLIRDVEGLEASGSSYICTLCDSTRSEASQNFILHSITRSHKENLERYEIWRS
NPYQEPVEELRDRVKGVSAKPFIETLPSIDALHCDIGNATEFYKIFQDEIGEIYKNPNPS
REEKKRWHSVLDKHLRKNMNLKPVMRMNGNYARKLMTKETVNAVCELIPSEERQEALKEL
VDLYLKMKPVWRSTCPAKECPELLCQYSFHSQRFAELLSTMYRYRYEGKITNYLHKTLAH
VPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKYYELEDVLKHHWLYTSKYLQKF
MNAHKALKGEMFIKGPEDIPEEPFDFEDSLGTFDSMEF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcccttagtgagcatgccgctgcgcaacatgcccgcagaacttcatcaccca
tacaaaaagttctccgaatggaagttcaaacttttcagggtgagatcgtttgagaaaact
gatccagttgaagtggaaacatccaacaaggagaacaagccaagccatgcagctcccttg
gaggctactcccttggtgatacaacacaaggaatcagcagctttggaaaacatacctcca
gcaggagttagtattctgaaagctaaaattacagaatccaaccagctgaaacccatcttt
gttgacaacaatcaacttgaaccaaatgatatgaagctgcaaactcatattgcaaacctt
caaagactttgccgcctctgcggagattgcttgaaaacagatggcagaaatatgagcttt
gcaatccaagggccagttgacaaaagcactgcagttcttctcaggaagatgagggtaaag
atcagttcctggccagatctaattttaaaagttttcagcactgatgtcagaggggacatt
aagtcagtccacccaacccatttctgccacacttgttggaccgtcatcagaaagtggatt
agtgacccaaacggccaagaaatgggtgtcctggcagacagggtggtggggtggctaccg
cattcactattttgcaagatctgcgacactggcaatagggccgtcaaaaggaaaaaccaa
caacagaatccacagtttgccaaaaggctcaagattggcaattctaagcgcttaagaaat
aaaaaacaaacagttcagtccaaaagcaaaaagaacgctttgatcaaaaagattgccaac
tgtaagaagatacacctgagtactaagttcctagcagcagaatatcctgttgattttgtt
aagtcaatgtcctgtcagatctgtgagcacattcttgctgacccagtgcagtctccatgc
aagcacctcttctgcagaacatgcattgccaagtgtaccagagttctgggcaattattgt
ccagcttgcaaacacccttgttttcctactgaccttgtaagcccagtcaaagtattcttg
aacatcttaaactcacttatggtaaagtgccctgccaaagagtgtgatgagcaagtcaga
ctggaagaatatagtagccattctcagagccacaaagaagtgaagttaggtgatgcttac
accccagcaaataaaggtgggcgcccaaggcagcaccttctgtccttgaccagaagggca
caaaagcaccgtttgcgagaacttaagcttcaagtgagggcatttgctgacaaagaagaa
ggtggggacgtcaagtcagtctgtctcaccctatttctgttggcactaagagccagaaat
gagcacaggcaagctgatgaattggaggctgttatgcaaggaaggggttcagcgctccac
ccagctgtctgcctcgccattcgagtcaacacctttctcagctgcagccagtaccataaa
atgtacaggacagtgaaagctacaactggaaagcagatcttccaaccattgcattctctt
cgaaatgcagagaaggctcttcttccaggtttccatccttttgagtggcaacctccttta
aaaaatgtgtccagtacaactgaagttggcatcattgatggaatgtctggaatgacacag
tttgttgatgaatacccactagacacaatttcaaaaagattcaggtatgatgcagctttg
gtttcagccttaaaggaccttgaggaagagttacttaagggactgatagaggaagacctg
gaagactatctaagtggcccgttcacagtcataattaaagagtcttgtgatgggatggga
gatgtcagtgagaagcatggaagtgggccagcagtccctgaaaaagcagtaaggtattct
tttacaatcatgaccatcagtgtggcaaacagtcataatgagaatgtaaccatttttgaa
gaaggcaagccaaactcagagctgtgttgcaagcccctatgtctcatgcttgctgacgaa
tctgatcatgagacactgactgccatcttgggtcctgtcattgctgaaagagaggcaatg
aaaaacagtgaactgttccttgaaatggggggaatcctcaggtccttcaaatttatcttc
cgaggcactggatatgatgaaaagctcataagagatgttgaaggtctcgaggcttcaggt
tcaagttatatttgcaccctctgtgattccacacgcagtgaagcttcacaaaacttcatt
cttcattctataacgaggagtcataaagagaatctggaaaggtatgaaatttggaggtcc
aacccataccaagagccagtagaagaactgcgtgacagagttaagggggtttcagccaaa
ccattcattgaaactctgccttcaatagatgccttacattgcgatattgggaatgcaact
gagttctacaaaatattccaagatgagataggggaaatttacaaaaaccctaacccttcc
agagaagaaaaaaagagatggcattcagttcttgataaacatctcaggaaaaatatgaat
ttaaagccggtcatgagaatgaatgggaattatgcaaggaaattaatgacaaaggagaca
gtgaatgcagtatgtgagttgattccttctgaagagagacaggaagccctcaaggaactg
gtggacctctatttgaaaatgaaaccagtatggcgttccacctgcccagccaaggaatgc
ccagagttgttatgccaatacagcttccactctcaacgatttgctgagcttctgtctaca
atgtataggtatagatatgaagggaaaatcacaaactatcttcacaaaactctggctcat
gttccagaaattattgaaagagatggctccattggggcctgggcaagcgagggtaatgag
tcagggaacaaactatttagacgcttcagaaaaatgaatgcccggcagtccaagtattat
gaactggaggatgtcctaaagcatcattggctctatacttctaaataccttcagaagttc
atgaatgcacacaaggctttgaagggcgaaatgttcatcaaaggtccagaagatattcca
gaagagccctttgattttgaggattctttgggtacctttgattccatggaattctga
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integrated database retrieval system
