Latimeria chalumnae (coelacanth): 102354260
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Entry
102354260 CDS
T02913
Symbol
HERC3
Name
(RefSeq) HECT and RLD domain containing E3 ubiquitin protein ligase 3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102354260 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102354260 (HERC3)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102354260 (HERC3)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
HECT type E3
102354260 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102354260
NCBI-ProteinID:
XP_006005133
Ensembl:
ENSLACG00000011128
UniProt:
H3ASL0
LinkDB
All DBs
Position
Un
AA seq
1049 aa
AA seq
DB search
MLCWGHGANGQLGMEEALDVVAEAQVCKFFNGRLVKEVACGGYHSVFLQNDGSVYTCGSS
TEGQLGHEKGGYKPEQVTNLSAQNIVHVACGRAHSLAVNDKGQVFSWGAGSDGQLGHGSA
DETIKVPRLIKKLNEHKVVQVTCGSRHCIALTKDGQLFTWGENTYGQLGLDKGCPAQPVP
QCVKSLAGIPLAQISAGGAHSFALSLSGAVFGWGKNTAGQLGLNDEQDRDVPCHVKSLRS
QNIVYLSCGEEHTAALTKSGGVFTFGAGSCGQLGHDSTNNEVNPRRVLELMGSEVSQIAC
GRHHTLALVLSTGLIYAFGDGRKGQLGTGYMCNAKSPSLVKGLWANPSQEFNTEIGKSRK
YTAKGIFCGGDQSFVVCMNFEKSFPPDDFRALNHLRCVSLINDEMINVWGQRLSETSDMN
TVDDVIQILSSAACWNGSFLDKRNDDHFKTSPKLPGIDLNSIKLLFEKLMKTQYTKLLKK
ASDSFESFLIPQLPSSPPDVEAMRIYLILPEFPLLRDSKYYITLTLPLAMTILRLDPNPS
RVLDNWWSQVGPSYFFQLVDLYKRAVVYLLTGGKTLLIPMLLNSYISAALRLLEKLHKVN
LKARHVDYDAFYIPEITNLVDIQEDYLVWFLHQAGLKIRPSITQNSVMLCSYPFVFDAQA
KTKMLHTDTELQMQVAINGASLENLFMLLTLEPLLARNPFLVLHVRRSNLVSDALRELSI
HSDLDLKKPLKVIFDGEEAVDAGGVTKEFFLLLIKELLDPIYGMFTYYKESNVLWFSEKC
FVEHNWFHLIGIMCGLAIYNFTVVDMHFPLVLYKKLLNVKPTLEDLKELSPTEGRSLQQL
LDYPGDDVEDTFCLTFSICRESYGVTEVKELVPGGNKLTVRKENRQEFVDAYVNYTFSSS
VQEWYQPFSSGFLKVCGGKVLQLFQPSELRAMVVGNNNYNWQQLEKNAVYKGEYSETHPT
VKMFWDVFHEFPLEKKKQFLLFLTGSDRIPIYGMGSLRIIIQSMSVGEQYLPVAHTCYNL
LDLPKYRTKETLRTRLTQAIDHYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctggggccatggagctaatggccagcttggaatggaggaggcccttgacgta
gtagcagaggcccaagtctgcaagttctttaacggcaggctggtgaaagaagttgcctgc
ggaggataccactccgtttttctgcagaatgacggaagtgtctatacctgcggctcaagc
accgaagggcagctgggccacgagaagggaggatacaagccagaacaagttacaaaccta
agtgctcagaatattgtccatgttgcttgtggaagagcccacagtctggcagtgaatgac
aaagggcaggtgttctcctggggagcaggaagtgatggacagctgggtcatggctctgca
gatgaaaccattaaagtaccgaggttaataaagaaactgaatgagcacaaggtagttcaa
gtcacctgtggaagcagacactgcatagcacttacaaaagatgggcagctcttcacctgg
ggagagaacacatatggccagcttggccttgacaaaggatgtcctgctcaacctgttccc
cagtgtgtgaaatctctggcagggataccgcttgctcagatctcggctggaggggctcac
agcttcgctctgtcgctgtcaggagcagtctttggctggggaaagaacaccgcaggacag
ctgggcctaaatgatgaacaagaccgggatgttccttgccatgtgaaatctctaagatcc
caaaacattgtttacttaagctgtggagaagaacatacagcagcccttacaaagagtgga
ggggtgttcacatttggagctggttcttgtggacagctggggcacgattctacaaacaat
gaagtcaatcctagaagggttctagaactgatgggcagtgaagtttcccagattgcttgt
ggcagacatcacacactagcacttgtgctgtcaacaggtctgatctatgcatttggcgat
gggaggaaaggccagttgggaactggttacatgtgtaatgccaaaagcccttctcttgtg
aaaggactctgggcaaatcccagtcaagagttcaacactgaaattggtaaatccagaaag
tacactgctaaaggtatcttctgtggaggagaccaaagttttgttgtctgcatgaacttt
gagaaatccttcccacctgatgactttcgtgctctcaaccatttacggtgtgtgagttta
ataaacgatgaaatgataaatgtgtggggacagagactttcggagaccagtgacatgaat
actgttgatgatgtaattcagatactctcttcagctgcttgctggaatggaagttttctc
gataagagaaatgatgaccactttaaaacgagccctaagcttcctgggattgacctaaac
tccatcaagctgttgtttgagaagctcatgaagactcagtatacaaaattgttaaaaaag
gcctctgatagctttgagagtttcctgatccctcagttgcccagttcaccaccagatgtt
gaagcaatgaggatctatttaattctgcctgagttcccactgctgcgtgactcgaaatat
tacattacacttacactgccgctggcaatgacaatacttcgacttgatccaaaccccagt
agagtgctagataactggtggtctcaggtgggcccgagctatttttttcaactggttgat
ctgtacaaacgtgcagtagtgtaccttttgacaggaggcaaaaccttattaatccccatg
ctgctaaacagctacatctccgctgcactccgactgctcgagaaactacacaaggtgaat
ctaaaggccagacatgtggactatgatgcgttctacatccctgagataaccaacctagtt
gacattcaggaagactaccttgtgtggttcttacatcaagcgggcttgaaaatcagacca
tctatcacacagaattcagtgatgctgtgctcttatccctttgtctttgatgctcaagcc
aagactaaaatgctgcacacagacactgaattacagatgcaggtagcgatcaatggagca
agcttagaaaacctcttcatgcttcttaccctggaacccttgcttgccagaaaccccttc
ctggttcttcacgtccgcaggagtaacttggttagcgacgcattgagggagctgagtatt
cattctgatttggacttgaagaaaccactcaaagtgattttcgatggtgaggaggctgtg
gatgccgggggagtcaccaaggagttcttccttctcctaataaaggagctgctggacccc
atttatggaatgtttacgtattacaaggagtccaatgtgctatggttctcagaaaaatgc
ttcgttgaacacaactggttccacctgattggtataatgtgtggcctggcaatctacaac
ttcactgtggtggacatgcacttcccgctggttctctacaagaagctgctgaacgtcaag
cccaccctggaggatctcaaggagctttctcctactgagggaaggagtcttcagcagctc
ctggattatccaggtgatgatgtggaagatacattctgccttactttctcgatctgcaga
gaaagttatggagtgaccgaggtaaaggagttggtacctggagggaataaattaacagtg
aggaaggagaacaggcaagagtttgtggatgcctacgtgaactacactttcagttcctca
gtgcaggagtggtaccaacctttctcaagtggcttcctgaaggtgtgtggaggaaaggta
ctccagctgtttcagccttcagagctcagagccatggtggtcggcaataacaactacaac
tggcaacagctggaaaagaatgcagtttataaaggtgaatattcggaaactcacccaact
gttaaaatgttttgggacgtcttccatgaatttccattggaaaagaagaaacaatttctt
ctgtttttgaccggcagtgaccgcatccccatctatggcatgggcagtttacggatcatc
attcagtccatgtccgtcggcgagcagtacttgcctgttgctcacacctgctacaatttg
cttgacctccccaagtacagaaccaaagagacgctcaggacccgactcacccaggccatt
gatcattatgaggggttcagcttagtgtga
DBGET
integrated database retrieval system
