Latimeria chalumnae (coelacanth): 102354329
Help
Entry
102354329 CDS
T02913
Symbol
VARS2
Name
(RefSeq) valyl-tRNA synthetase 2, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102354329 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcm01007
]
102354329 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcm03016
]
102354329 (VARS2)
Enzymes [BR:
lcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
102354329 (VARS2)
Amino acid related enzymes [BR:
lcm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102354329 (VARS2)
Transfer RNA biogenesis [BR:
lcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102354329 (VARS2)
Prokaryotic type
102354329 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
102354329
NCBI-ProteinID:
XP_014345213
Ensembl:
ENSLACG00000001576
LinkDB
All DBs
Position
Un
AA seq
1085 aa
AA seq
DB search
MALTRICGELSSRGRQVLPWLSARAQLTGSRSGSRRFQGSWAGKGGSAVDHKQGWIRNKA
EKEKRQQERLAAIELRTRGEKQKAPEEKERKWREKEVVTYTVPTLPGQKKVTTGPMPESY
SPSYVEAAWYSWWETQGFFKPEYHEHLPDCKEKTFALCIPPPNVTGSLHLGHALTVAIED
SLVRWHRMKGWKVLWVPGCDHAGIATQAVVEKKLQKETGLLRQDLGREQFLQAVWRWKEE
KGDEIYHQLRRLGASLEWGRACFTMDQTFSSAVMEAFVRFHEAGLVYRSQRLVNWSCALK
SAISDVEVEMLQLKGRTFLSVPGYKKTIPFGVMVKFAYKLEGGGEQEVVVATTRPETMLG
DVAVVVHPDDPRYAHLHGKQVEHPFTGQSLPVLTDPLVERSLGTGAVKVTPGHDYSDYEL
GLRHGLPLVSVIGEDGRMSSESGDWLKGVERFLAREKVIEALAERGLYRGSQSHPMVLPL
CSRSGDVVEPLLKEQWFIRCGGMAQDAMEAVNRGCLTLFPQFHEKTWRNWMGNVSDWCVS
RQLWWGHQIPAYRVSFPGSGDADQSDCNALWVVGRTEHDARLKAAEKFGKPLEELTLTRD
ADVLDTWFSSALFPFAMLGWPEETPDLQNFYPNSLLETGSDLIFFWVARMVMLGRQLTGQ
LPFSKVFFHSMVRDAHGRKMSKSLGNVINPLDVITGISLEHLHQKLEEGNLDPRETAIAT
EGQRRDFPQGIPECGTDALRFALCSYKCHGDDINLDVKLVHSARHFCNKIWNAMKFTFAA
LGPDFRAPLGDQIAPESPVDHWICSRLHQAAAACNRGFEELDFNAATSAIRSFWLHSLCD
VYLECVKPVLQSGDTPPVQVVQRVLYFCTERALCLLAPFMPYLTEELWQRLPRPGGNAAP
SVCVTTYPTAAELAKWYNPEEEANFLLVQEVVHVVRSLRADYQLTKQKPELYVACSEDRA
RRVLDSYHLALRTLSRCSSVTLLDAEGGVPSGCAVGIVSKECRVHLRLEGLVDSERELEK
LRRRRERLQSQLAAVVNKTEIQGYEHGVPETVQQETAAKISTLEEKLAQVEKASRTFQQL
LKSQS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggctctgactcggatttgtggggagctcagctccagaggcagacaagtgctaccctgg
ctcagtgccagggcccagctgactgggagcaggtccgggagcaggagattccaaggcagc
tgggctgggaaagggggctccgctgtggaccacaagcaaggttggattcgtaataaagcc
gagaaggagaagaggcaacaggaaaggcttgcagccatcgagctgaggacgaggggtgaa
aagcagaaggctcctgaagaaaaggagaggaagtggagagagaaggaggtggtaacgtac
actgttcccacgctgcctggacagaagaaagtcacgacgggacccatgccagagtcgtat
agtcccagctacgtggaggctgcctggtattcctggtgggagacgcagggattcttcaaa
ccagagtatcatgagcatcttcctgactgcaaagagaagacgtttgccctgtgtatccct
ccgcccaacgtcacgggatcgctccacctcggacacgcgttgactgttgctatcgaggac
tccctggtgcgatggcacagaatgaagggctggaaggtgctttgggttccaggctgcgat
catgcaggaatcgccacgcaggctgtagtggagaagaagctacagaaggagactggcttg
ctgcggcaggatctggggagagagcagttcctgcaggctgtgtggagatggaaggaggaa
aaaggggatgagatttaccaccagctccgaagactgggggcctctctagaatggggaaga
gcctgcttcaccatggatcagacgttctcaagcgctgtgatggaagccttcgtgcgcttc
cacgaggcggggctggtgtaccgcagccagcgcctcgtcaactggtcctgcgccctcaag
tcggccatttctgacgtggaggtggaaatgctgcagctaaaaggacggaccttcctctcg
gtgccaggctacaagaagactatcccgtttggggtcatggtgaagtttgcttacaagctg
gagggaggcggtgagcaggaggttgtcgtggcaacgacgcggcccgagacgatgttgggg
gacgtggcagttgtggttcacccggatgatccacgatacgcacaccttcacgggaaacag
gtggagcacccattcacaggccagtcgctgcccgtgctaacggaccccctggtggagcgc
tccctcggaaccggtgcagtgaaggtgaccccaggccacgactactcggactacgagctt
ggacttcgacacgggctgcccttggtgtcggtcattggggaggacgggagaatgtccagc
gagagcggagactggctcaagggagtggaacggttcttagcccgggaaaaggtgatagaa
gcactggcggagagagggctgtatcgggggagtcagagccaccccatggtgcttccgttg
tgcagtcgctcgggagacgtagtcgagcccttgctgaaggagcagtggttcattcggtgt
ggagggatggctcaggacgccatggaggctgtgaatcgcggctgcctgactttgttccca
caattccatgagaagacttggcgaaactggatggggaacgtcagtgattggtgcgtctcc
aggcagctgtggtggggccatcagattccagcttatcgggtttcctttccggggtcaggt
gatgcagatcagagcgattgcaatgcactctgggtggtgggacgtacggagcatgatgct
cgcttgaaggccgctgagaagtttgggaagccccttgaagagttgacgttgacccgggat
gcggacgtgttggatacctggttctcctcagctctgttcccgtttgcgatgctcgggtgg
ccagaagagactccagaccttcagaacttctatcccaactccctcctggagacaggaagt
gacctcatcttcttctgggtggcccgcatggtgatgctgggaaggcaactaactggacag
cttccgttttcgaaggtgttcttccattcgatggtgcgggacgcacatgggcggaagatg
agcaagtctcttgggaacgtgatcaacccgctggatgtcatcactggcatttcgctggag
catctgcatcagaagctcgaagaagggaacttggatccccgggagaccgcgatcgccaca
gaggggcagaggagggattttccccaggggatcccggagtgtggcacggacgccctgagg
tttgccctctgttcctacaagtgtcacggagatgatattaacctggacgttaagctggtg
cacagcgcccgccatttctgcaataaaatctggaacgctatgaagttcaccttcgcagct
ctgggaccggatttccgagcccctttgggagatcagatcgctccggagtcccccgtggac
cattggatctgcagtcggctgcaccaggccgcagccgcgtgtaaccgcggattcgaggag
ctggacttcaacgcggcgacctcggccatccgcagcttctggctgcacagcctctgcgac
gtttacctggagtgtgtgaagcccgtgttacagagcggagatactcctcccgtccaggtg
gtgcaacgggtcctgtatttttgcaccgagcgcgccctctgcctgctcgcgcccttcatg
ccgtacctgacggaggagctgtggcagaggctgccgagaccagggggcaacgctgcaccc
agcgtctgcgtgaccacttaccccactgctgctgaactggctaaatggtataatcctgaa
gaggaggctaacttcctgttggtacaggaagttgttcacgtagtgaggtcgctaagggca
gactatcagttgactaaacagaaacccgaattgtacgtcgcctgttccgaggatcgagcc
cgccgtgttctggattcgtaccatctggcgctgcgcacgctgtcacgctgcagctctgtg
acactcctggacgcggaaggtggcgtgcccagcggctgtgccgtcggaattgtcagcaaa
gaatgtcgggtgcatctgcggctggagggtttggtggattcagagcgggagctggagaag
ctgagacggagacgggagaggctgcaatcgcaactcgcagccgtcgtgaacaagaccgaa
atccagggttacgagcacggggtccccgagactgtccagcaggagactgcagccaagatc
tcgactctggaggagaagctggcccaagtagagaaggcatcccggactttccagcaactt
ctgaagagccaatcgtga
DBGET
integrated database retrieval system
