Latimeria chalumnae (coelacanth): 102354347
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Entry
102354347 CDS
T02913
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcm03036
]
102354347 (SMARCAL1)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102354347 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
102354347
NCBI-ProteinID:
XP_014348934
Ensembl:
ENSLACG00000010974
LinkDB
All DBs
Position
Un
AA seq
957 aa
AA seq
DB search
MSSSLTEEQKKKIEENRKRALARRAERIAAQQQQVKQLGAGQSTSVPSSFNQYGSNTQGC
SPVQCTKLGGLGSGPPTSHLPSSYATGTLQHQLSTHGLKGFSDCFSAQQNSGVQGTVQKQ
GPTVGYNGGHQAQQKAFDSQKLNVPNAASYVAQKPMNSSGPIQVQQASSNQETLRQGNYQ
SEFKRPASSTHQNSNSSSSGSSTFAGEFGFAASEKSSPGSFVSNSLQQSCGAVGLQNSVN
KIGHESSSKQDGTAVSKFYGSGPKVKAPVTTSCSVETVCTTAVCKEGPAFGGVVAKKAPN
VIRGRCVMHNEDRFRVEVGYCADLISLFKNMPTRNYDPVTKMWNFSLEEYNSLMEAVQQV
PTVVLKPLDGVETHNLAASSGSLSMGSNLNTLLMICKNWKRPSATTRGRCVLISHSRFEV
EIGYHAEAIGLFKQMNSRNYDMKTRKWSFLLEDYKNLMEAMLKIPSVEIEPLPRAVVQVF
HALFKNSQMDSSEISEADLSKVDSKLTDSLMPFQREGVNFAISREGCLILADDMGLGKTI
QAICIAAYYRNEWPLLVVSPSSVRFTWAEAFHRWLPSVSPDSINMIVKGKDSLTSGLINI
ISYDLLSKVDKQLLAANFKVVIMDESHFLKNVKTARCKAAMLLLKVAKRVILLSGTPAMS
RPSELYTQITAVRPTFFPRFHDFGVRYCNAKQLPWGWDYSGSSNLNELKLLLEKSIMIRR
LKSDVLSQLPTKQRKMVVVAPERMNAKTKAALEAAAMEMTKGYKSKLQKREALLEFYNRT
AEAKIRAITEYIMDLLESGREKFLVFAHHKLVLDAVCEELEKRVLIQAEDRVHRIGQTSS
VNIHYLVAKGTADDFLWPMIQKKMKVLGQAGLSETNISETAEATDYFYKMDPKQKTICDL
FQKSFSEAGDDDEEMLLLEAAEACQNLEVEGTVCDSGETCTASPSKKRHIEDYFGKP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagcctcactgaagaacagaagaagaagattgaggagaacaggaaaagagcc
ttggctagaagggcggagagaatagcggctcaacagcagcaggtcaagcaactgggtgct
ggccagagtacctctgtcccatcaagcttcaaccagtatggctcaaacacacaaggatgt
tcaccggtgcagtgtaccaaattggggggtctgggatcaggtccccccacctctcacctt
cccagttcatatgccacaggcactttgcagcaccagttgagtactcatggtttgaaagga
ttctctgactgcttcagtgcacaacagaattcaggtgtgcaagggacagtgcagaaacag
gggcctacagtgggatacaatggagggcaccaggctcagcagaaggcattcgattcccaa
aagttaaacgtcccaaatgctgcaagttatgtagcccagaaaccgatgaactcttcaggt
ccaatccaagttcagcaagcctcaagtaaccaagaaacattgcgacaagggaattatcag
tctgagttcaaaaggcctgcaagctccacacaccagaattcaaatagcagcagcagcggc
tcaagcacatttgctggtgaatttggttttgcagcttcagagaaatcttcccctggaagt
ttcgtcagtaattctctacagcagtcatgtggcgctgtgggactgcaaaatagcgtaaac
aaaattggccacgaaagttcttcgaaacaggatgggactgctgtttctaaattctatggt
tcagggcctaaagtaaaagctcctgtcacaactagctgttctgtggagacagtgtgcacc
acagctgtctgcaaagaaggccctgcttttgggggtgtggtggctaagaaggcaccgaac
gttatcagagggaggtgtgtgatgcataatgaagaccgattccgtgttgaggttggatac
tgtgcagacttgatctcattgtttaaaaacatgccaacaaggaactatgatcctgtgaca
aagatgtggaattttagcctagaggagtacaactctcttatggaggctgtgcagcaggta
cctactgtggtcttgaagcctttagatggggtggaaactcacaacttggctgccagttca
ggatctttgagcatgggctcaaaccttaacacactcctgatgatatgcaagaactggaag
aggcccagtgcaactacacgaggcaggtgtgtgctgatctctcattctcggttcgaggta
gagatcgggtaccacgctgaggctatagggctattcaaacagatgaactccaggaattat
gatatgaagaccagaaagtggagctttctactggaggactataagaatctcatggaggct
atgttgaagatcccctcagtggaaattgagccattgcctagagctgtggttcaggtattc
catgcactatttaagaattcccaaatggatagttctgaaatttctgaggctgacctttct
aaagtggattccaaactgacagacagcctaatgcccttccagagagaaggtgtgaatttt
gcaatatcacgagaaggttgtctgatcctggctgacgacatgggcttggggaagacaatc
caggccatctgtatagcagcctattacaggaatgagtggccactgctggttgtttcgcct
tcatcagtcagatttacctgggctgaggcgtttcacaggtggctcccatctgtaagccca
gacagcatcaatatgatagtgaaaggaaaagacagcttgacgtcaggtttgatcaatatt
attagctatgaccttctcagcaaagtcgataagcagcttttggctgccaactttaaagtt
gtaattatggatgaatctcattttttgaagaatgtgaaaactgcaaggtgcaaagctgcg
atgcttctgcttaaggttgccaagagagtgattttactttcggggaccccagccatgtcc
agaccctcagaactctacacccagatcactgctgtcagaccgactttcttcccaagattc
catgactttggggtccgttactgtaatgctaaacagcttccttggggatgggactattct
ggatcatccaacctgaatgagctaaagctcttactggagaagtccatcatgatccgacgt
ctgaaatctgatgttttgtcccaactccccactaaacagcgcaagatggtagtggtggca
ccagaaagaatgaatgccaaaactaaagctgcactggaggcagctgctatggaaatgacc
aagggctataaaagtaagctccagaagagagaagctctgttggaattctataatcgaact
gcagaggctaaaatccgagcaatcacggaatatataatggatttgctggaaagtggacga
gagaagttcctggtgtttgctcaccataaactggtgctggatgcagtatgtgaggagctg
gaaaaaagggtgttaattcaggcagaagacagagttcatcgaattggacagaccagttct
gttaacatccactacctggtggctaaaggaactgcagatgactttctctggccgatgatt
cagaagaagatgaaggtgttgggtcaggctggtctgtctgagactaacatctctgaaaca
gcagaagcaacagactatttttataaaatggatccaaagcagaagacaatctgtgatctt
ttccagaagtcgttctctgaggctggggacgatgatgaagaaatgctgctcctggaagct
gctgaggcttgtcaaaacttagaggttgaaggcacagtgtgtgacagtggagaaacttgc
acagcgtctcccagtaagaaaagacatattgaagactattttgggaaaccatga
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