Latimeria chalumnae (coelacanth): 102354350
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Entry
102354350 CDS
T02913
Symbol
CALCOCO1
Name
(RefSeq) calcium binding and coiled-coil domain 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102354350 (CALCOCO1)
04131 Membrane trafficking [BR:
lcm04131
]
102354350 (CALCOCO1)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
102354350 (CALCOCO1)
Membrane trafficking [BR:
lcm04131
]
Autophagy
ER-phagy
ER-phagy recepters
102354350 (CALCOCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
ACBP4_C
TMF_TATA_bd
OVT1
Motif
Other DBs
NCBI-GeneID:
102354350
NCBI-ProteinID:
XP_014349328
LinkDB
All DBs
Position
Un
AA seq
648 aa
AA seq
DB search
MEGQQVSVSQAVSQSKVMFHNVARSYIPSTKLECHYTLSPGMKWSTRDWIGIFKVGWSSM
RDYYTFEWSVVPDSYKEGASMNCYVQFQGLKRPGQLGQCEKEKEELLTLKLQLEAEVKGL
QEEIEKLTTSLQAAQEEQVKVAEQCKELLKARELVSAERDSLIHQRADSIARILELEEDI
KVINRKVLEKETELDRMKDRVKKLVSQQEQLGKQLREEAEDKERYQAKFKALEQENRKLS
YDLQATRGTLGEKEKQILQLREEISKVQQKLSTAQEKRGQVELLCEQLRSIQDQLAASQQ
KVVLMGEELASASSIRDRTMSDLHKSRLEVAELNIKLADMTLKWKETKAQWLKEKAMILE
SSEAEKEKVLKLSTEVLKLESGLQEEISEKANLKVELSMERDSSKVQLSESRRELKESKS
ALWVAQKEKEQLQEEKRELLEYIKLLEQRLDKVADSKWSETVRADTPDGQDSPLSDSEDE
APEDMRARAQLSPYGLCDNRVAAEMLVLSTPPLSPRELAQEVVISQPVPISSQIKQLSEE
ENTSDSEAEDDKDTLMVLAQGTGEETTLLLPELGHAFQYTVSSDDDSRQNSAEGRYDCVQ
RDRAAGSGLWKECPICKERFPLEFDRDALEEHIDSHFFFSTHDPFTFE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggagggacagcaggtcagcgtgtcgcaggcagtgtcccagtcgaaggtgatgttccac
aatgtggcacggtcctatatccccagcaccaagttggaatgtcactataccctttcaccc
gggatgaagtggagcaccagagactggattgggatattcaaggtgggctggtcatccatg
cgagactattacacctttgagtggtcagtagttcctgatagttataaggaaggagcctct
atgaactgctatgtacagtttcaaggtctgaagagacctggccagctggggcagtgcgag
aaagaaaaggaggagctgctgacgttaaagctgcagctggaggcagaagtgaagggactt
caagaggagattgaaaaactcaccacctcgctccaagctgctcaggaggagcaggtgaag
gtggctgagcaatgtaaggagctgttgaaagccagggagctggtgagtgcagagcgggat
tcgctgatccatcagcgagcagacagcatcgccagaatcctggaactagaggaggacatc
aaagttatcaacaggaaggtgctggagaaggaaactgagctggacaggatgaaggaccga
gttaagaagctggtgagccagcaggagcagcttggcaagcaactccgagaagaagctgaa
gacaaggaacgttatcaggcaaagttcaaggcattagaacaggagaacaggaagctgtcc
tatgacctccaagccactagaggcaccctgggtgaaaaagaaaaacagattcttcagctg
agagaggagatcagcaaagtacagcagaagctttctacagctcaggagaaaaggggtcag
gtggagttgctgtgtgaacagctgcgttccatccaggaccagctggcggccagccaacag
aaagtggtgcttatgggggaggaactagcaagtgcgtcatctatccgggaccgcaccatg
tcagaccttcacaagagccggctggaagtggcagagctcaacatcaagctagccgacatg
accctcaagtggaaggagaccaaggcccagtggctgaaggagaaggcaatgatacttgaa
agctccgaggctgaaaaagagaaggtcctgaagctgagtactgaggttctgaaactggag
agcggccttcaggaggagatttcagagaaagcaaacttgaaagtggaactgagcatggag
agagattccagcaaggtgcagttgtccgagagtcgccgtgagctgaaggaatccaaatct
gccttgtgggttgcgcagaaggagaaagagcagcttcaagaagaaaagcgggagttgctg
gaatatattaagctgttggagcagagactggacaaggtggccgattccaaatggagtgag
acggttcgggctgacacgccagatggtcaagactccccgctcagcgactcagaggatgaa
gcccctgaggatatgagggctcgcgctcagctcagcccctacggcttatgtgataaccgg
gtcgctgcggaaatgctggttctcagcaccccgcccctgtcgccccgggaactggctcag
gaggtcgtgatcagccagccggttccaatctcttcccagattaaacagctgtcagaggaa
gaaaacacttcagactctgaagcagaggacgacaaggatacactgatggttcttgctcag
ggtacaggagaagaaaccacattgctactgcctgagcttggacacgccttccagtacact
gtcagtagcgacgatgacagccggcagaactccgcagaggggcggtacgactgcgttcag
cgagaccgagccgccggcagcggcttgtggaaggagtgcccaatctgcaaggagaggttc
cccctggagttcgacagggacgccctggaagaacacatcgacagtcacttcttcttcagc
acccatgaccccttcaccttcgagtga
DBGET
integrated database retrieval system
