KEGG   Latimeria chalumnae (coelacanth): 102354614
Entry
102354614         CDS       T02913                                 
Symbol
POLR2F
Name
(RefSeq) RNA polymerase II subunit F
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03020  RNA polymerase
lcm03420  Nucleotide excision repair
lcm04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102354614 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102354614 (POLR2F)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    102354614 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcm03021]
    102354614 (POLR2F)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102354614 (POLR2F)
Transcription machinery [BR:lcm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     102354614 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     102354614 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     102354614 (POLR2F)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102354614 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 102354614
NCBI-ProteinID: XP_006002008
Ensembl: ENSLACG00000003931
UniProt: H3A449
LinkDB
Position
Un
AA seq 127 aa
MSDNEDNFDGDDFDDVEEDEGLDDLDNAEEEDRENVEILPAGEGQQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtctgacaatgaggacaattttgatggagatgattttgatgatgtagaggaggatgaa
ggactggatgatttggacaatgctgaagaggaagaccgggagaatgtggaaatcttgccg
gcgggggaggggcagcaggccaatcagaagaggataacgaccccctacatgaccaagtat
gagcgagccagggtcctgggcacccgagccctgcagatagctatgtgcgccccagtgatg
gtggagctggaaggtgagacagaccctcttcagatcgcaatgaaggagctcaaagccaga
aagattccaatcatcattcgccgttacctgccagacggaagttacgaagactggggcgtg
gacgagctcatcattacggactga

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