Latimeria chalumnae (coelacanth): 102354919
Help
Entry
102354919 CDS
T02913
Symbol
DDX18
Name
(RefSeq) DEAD-box helicase 18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102354919 (DDX18)
03009 Ribosome biogenesis [BR:
lcm03009
]
102354919 (DDX18)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102354919 (DDX18)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102354919 (DDX18)
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
90S particles
Helicases
102354919 (DDX18)
Pre-60S particles
102354919 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
102354919
NCBI-ProteinID:
XP_005991119
Ensembl:
ENSLACG00000015308
UniProt:
H3B658
LinkDB
All DBs
Position
Un
AA seq
580 aa
AA seq
DB search
MKRKKKRKITVHDTQETGTKKLKSSEDRDEAAEDGVNNTDEADGTEGSEVTDPENENFEK
EEEKPDEDESDDLELPLGLTGAFEDTSFTSLADLVSENTLKGITEMGFTHMTEIQHKSIR
PLLEGRDILAAARTGSGKTLAFLIPAVELVYKLKFMPRNGTGVLILSPTRELAMQTYGVL
KELMTHHVHTYGLIMGGSNRSAEASKLANGINILVATPGRLLDHMQNTPGFMYKNLQCLV
IDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKVSLKKEPLYVGVDDN
KDTATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLP
VMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIH
RVGRTARGIDGRGHALLILRPEELGFLRYLKQAKVPLNEFEFSWSKVSDIQSQLEKLVEK
NYYLHKSAQEAYKAYIRAYDSHSLKQIYSVNTLNLPKVAQSFGFKVPPYVDLNINSSKGR
KLQKRGGGGGFGYQKSKNVHKARIFKHISKGRTDNRQFSH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaaaagaagaggaaaatcaccgtgcacgatacgcaagaaaccggaacaaaa
aagctgaagagttcggaggacagggatgaggccgctgaggatggcgtgaacaatacagat
gaggcagacggcaccgaaggctccgaagttactgatccggaaaacgagaattttgagaag
gaggaagaaaaaccagatgaagatgagagcgatgaccttgagttacctttaggcctgaca
ggggcgtttgaggacacatccttcacttccctggctgacctggtcagtgagaacactctc
aaagggatcaccgaaatgggctttacccacatgacagaaattcagcataaaagtattaga
ccgctcctggaaggcagggacattcttgcggctgctaggacaggaagtggaaagacgttg
gcttttctgattcccgccgttgaacttgtgtacaaattaaagttcatgcctaggaatgga
actggcgtgcttattctttcccctacccgtgagttagccatgcagacctatggcgtgctg
aaggagctgatgacgcaccacgttcacacgtacggcctgataatgggaggaagtaaccga
tcagcagaggctagtaaactcgcgaatggaatcaacatcctagtggcgactccaggcagg
ctcttggaccacatgcagaacactccgggattcatgtacaagaacctgcagtgtcttgta
attgatgaagctgatcgcattctggaggttggatttgaggaggaaatgaaacagattatt
aaacttcttccaaagcgaagacagactatgcttttttctgccacacaaacccgaaaagtt
gaagacttggctaaggtttctcttaaaaaggaaccattatatgtaggtgttgatgacaac
aaggacaccgcaacagtggatggtctcgagcagggatatgtggtgtgtccatctgagaag
aggttcctcttgctcttcaccttcctgaagaagaaccggaagaagaagctgatggtcttt
ttttcttcatgcatgtccgtaaaatatcattatgaactgctgaactacattgacctgccg
gtcatggctattcacggcaagcaaaagcaaacgaaacgtaccacaacctttttccagttc
tgtaacgcggactccggaatccttctctgtacggatgttgctgccagaggcctggatatt
cctgaggtggattggattgttcagtttgaccctccggatgatcctaaggaatacatccac
cgtgtgggtagaacggccagaggtattgatggcagaggtcatgctctgcttattttgagg
cccgaagaattgggttttcttcgctaccttaaacaagccaaggttccattaaacgaattt
gagttttcctggagtaaggtttccgacatccagtctcagcttgaaaagttagttgagaag
aactactacctgcacaaatcggctcaagaagcgtacaaggcgtatatccgggcctacgat
tcgcactcccttaaacagatctacagcgtcaacactttgaatcttcccaaagttgctcag
tcctttggttttaaagttcctccatacgttgacctcaatataaacagcagtaaagggagg
aaactgcagaagagaggaggtggtggtgggtttggataccagaaatccaaaaatgttcac
aaagcgaggatcttcaaacacatcagcaaaggcagaacagacaaccgacagttttctcat
taa
DBGET
integrated database retrieval system
