Latimeria chalumnae (coelacanth): 102354964
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Entry
102354964 CDS
T02913
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102354964 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102354964 (SMARCA5)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102354964 (SMARCA5)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
102354964 (SMARCA5)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
102354964 (SMARCA5)
RSF complex
102354964 (SMARCA5)
WICH complex
102354964 (SMARCA5)
B-WICH complex
102354964 (SMARCA5)
NORC complex
102354964 (SMARCA5)
BRF complex
102354964 (SMARCA5)
NuRF complex (fruit fly)
102354964 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
Myb_DNA-binding
HDA2-3
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
102354964
NCBI-ProteinID:
XP_006002943
Ensembl:
ENSLACG00000007091
UniProt:
H3AEE1
LinkDB
All DBs
Position
Un
AA seq
1017 aa
AA seq
DB search
MSEPEKKVKSEEERVEEEEQGVFFGGNESLPDKQVESKENDTNYEEKMQADRANRFDYLL
QQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGDNRHRRTEQEEDEELLT
ESSKTTNVCTRFEDSPSYVKGGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTI
SLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVLL
PGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLT
GTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRI
KADVEKSLPPKKEVKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRKC
CNHPYLFDGAEPGPPYTTDMHLVTNGGKMVVLDKFLPKLKEQGSRVLIFSQMTRVLDILE
DYCMWRNYEYCRLDGQTPHEERQNSINVFNAPNSTKFLFMLSTRAGGLGINLATADVVIL
YDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGR
LVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDIDAILERGEKKTAEMNEKLSKMG
ESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEPPKRERKANYAVDAYFREALRVSE
PKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDLPNAVQAQKEE
QSKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKT
PEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLR
ISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAME
LQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSPAQKRKLDGAAESRGRKKKLKL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagccggagaaaaaggtgaagtctgaggaagaacgtgtagaagaggaagagcag
ggagtgttttttggtggtaatgaatccttgccagacaagcaagtggaaagtaaagagaat
gatacaaattatgaagagaaaatgcaagcagaccgagcaaacaggtttgactatttgctg
cagcagacagagctctttgcccactttatccaacccgctgctcagaagaccccaacctct
cctctgaaaatgaagcctggccgtcctcgcattaagaaggatgagaaacagaatctgctg
tcagctggggacaataggcatcgcagaacagagcaagaggaagacgaggagctcctgact
gagagctccaagacaactaatgtgtgcactcggtttgaggattcaccctcgtatgtaaaa
ggaggcaagctgagagattaccaggtccgtggcttaaactggcttatatccttgtatgag
aatggcatcaatggcatcctggcagatgaaatgggtctaggtaagacactgcaaaccatt
tcacttcttggctacatgaagcactacagaaacattcctggtccccacatggttttggtc
cctaagtcaactctacacaactggatgaatgagtttaaaagatgggtgccaacacttcga
gctgtctgcttgattggggacaaggaccaaagagctgcttttgtcagagatgtgctgctg
ccaggcgagtgggatgtctgcgtgacatcatatgaaatgctgattaaggagaaatcggtg
tttaaaaaatttaactggcgatatctggtcatagatgaagctcacaggatcaaaaatgaa
aaatctaagctctcagaaatagtaagagaattcaagaccactaatagactgctgttaacg
ggaactcctcttcaaaataacctgcatgaactttgggcacttcttaactttctgttgcct
gatgtctttaactcagctgatgactttgattcatggtttgatacaaacaactgtcttgga
gaccagaagctagttgaacgtctgcatatggtgttgcgaccttttttgcttcgtcgtatt
aaagcagatgtggaaaagagtttaccaccaaagaaagaagtaaaaatttatgtgggcctt
agcaagatgcaaagggagtggtacacaaaaattttgatgaaggatattgacatcttaaac
tcagcaggaaaaatggacaagatgaggttattgaatattctgatgcagctgcgaaagtgt
tgcaaccatccttacctttttgatggtgcggagcctggcccaccttacacaactgatatg
caccttgttacaaatggtggtaaaatggtggtgctggacaagtttctgccaaaactgaag
gagcaaggttctcgtgtgctgatttttagccagatgaccagagtactagatattttggag
gattactgcatgtggcgaaattatgaatattgcaggttggatgggcaaactccacatgaa
gagagacagaattccatcaatgtttttaatgcaccgaacagcacaaagtttctgtttatg
ttgagcacccgtgctggagggcttggaattaaccttgctactgcggatgttgtaatttta
tatgattcagactggaatcctcaagtggaccttcaggctatggatagagctcaccgaatt
ggccagacaaaaactgtccgagtgttcaggttcatcacagataacactgtagaggaaaga
atagtggaacgtgcagaaatgaaactcaggttggattccattgtcattcagcagggcaga
ttagtggatcagaacttgaataaattaggaaaagatgaaatgctacaaatgattcgacat
ggtgctacacacgtgtttgcctcaaaggagagtgaaatcacagatgaggatattgatgcc
atattagaaaggggtgaaaagaagacagcagaaatgaatgagaagctctcaaagatgggc
gaaagctcacttagaaattttaccatggatacagaatctagtgtttacaactttgaagga
gaagattacagagaaaagcagaagatggcgtttactgagtggattgaaccccctaaacga
gagcgaaaagccaactatgctgtggatgcttacttcagggaggcactccgtgtcagtgaa
ccaaaagcacccaaggctcctcgtcctccgaaacagcccaatgtccaagattttcagttt
ttccctccacgcttgtttgagctgcttgaaaaagaaatcctgtactataggaagactata
gggtacaaggtacctcgcaatcctgatctgccaaatgcagttcaagcacagaaagaggag
caaagtaaaatagatgaagctgaacccttgaatgatgaagagctggaagaaaaggagaaa
ctattaacacagggattcaccaactggaacaagagggattttaaccagtttatcaaggcc
aatgagaaatggggtcgtgatgatattgaaaacatagcacgcgaggttgaaggcaaaacc
ccagaagaagtgattgagtactctgcggtgttttgggagagatgtaatgagcttcaagac
attgagaaaatcatggctcagattgagagaggtgaagccagaatccagagaaggattagt
atcaaaaaggcacttgacaccaagattggacgttacaaagcaccattccaccagttgaga
atctcttatggcacaaataaaggaaagaactacacagaagaggaggaccgtttcctgatt
tgcatgcttcataaattgggatttgacaaggaaaatgtttacgatgaactgaggcagtgt
attcggaattcaccacagttcagatttgactggttcctcaagtcaagaactgcaatggag
ctgcagaggaggtgtaataccctaattactctaattgaaagagagaacatggaactggaa
gaaaaagagaaagctgaaaagaagaagcgtggaccaaaaccttctccagcacagaaacgc
aaattggatggcgctgcagaatccagaggcaggaaaaagaaattaaagctgtga
DBGET
integrated database retrieval system
