Latimeria chalumnae (coelacanth): 102355076
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Entry
102355076 CDS
T02913
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00260
Glycine, serine and threonine metabolism
lcm00630
Glyoxylate and dicarboxylate metabolism
lcm00670
One carbon pool by folate
lcm01100
Metabolic pathways
lcm01200
Carbon metabolism
lcm01230
Biosynthesis of amino acids
lcm01240
Biosynthesis of cofactors
lcm04981
Folate transport and metabolism
Module
lcm_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
102355076 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
102355076 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
102355076 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
102355076 (SHMT2)
Enzymes [BR:
lcm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
102355076 (SHMT2)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
102355076
NCBI-ProteinID:
XP_005986324
Ensembl:
ENSLACG00000019075
UniProt:
H3BII8
LinkDB
All DBs
Position
Un
AA seq
542 aa
AA seq
DB search
MVHLVQVVQVLRAGPSGARCAGAETLGDSAEPQSGAAAGAMLSVSLRKLASPLKRWCWVA
AVGSRAQHTKAASQLGDSTQWTGQESMADSDPEMWNLVQKEKDRQCRGLELIASENFCSR
AALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIEELCQKRALEAFDLDPSRWGVNVQPYS
GSPANFAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIYFESMPYKLNPSTG
LIDYDQLEVTARLFRPRMVIAGTSAYARLIDYARMRKVCDEVRAYLLADMAHISGLVSAK
VVPSPFEHADIVTSTTHKTLRGARAGLIFYRKGVQSVNKKTGKEVMYDFEDKINFAVFPS
LQGGPHNHAIAAVAVALKQVNSAMFREYAQQVLKNAKAMAASLNKKGFTLVSGGTDNHLV
LVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGAPALTSRQFREADFE
QVVDFIDEGIQIAVDVKMKTAKLQDFKSFLLKDEETKAKMADLRQRVEKFTRAFPMPGFQ
DH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacttggtgcaggttgtgcaggttctccgcgcaggtcccagtggggcccgctgc
gcaggcgcagagacgcttggggattccgcggagccgcagtcgggagccgcagctggagcc
atgctgtctgtgtcgttgagaaagctcgccagccccttgaagagatggtgttgggtggca
gcagtgggatcccgagctcagcacacaaaggcagcctcccagctgggagactccacccag
tggacagggcaggagagcatggctgacagtgaccctgagatgtggaacctcgtccagaaa
gaaaaggaccggcagtgccgtggacttgagctcattgcttcagagaacttctgcagccgt
gctgcgctggaagccttgggatcctgtcttaataacaagtattcagaaggctaccctggg
aaaaggtactacggtggggcagaagtggttgaccagattgaggagttgtgtcagaagcga
gctctagaggcctttgatctagacccatcccgctggggggtgaacgtgcagccgtactcg
ggatcgccagcgaactttgcagcttacacagcactcttgcagccccacgacagaatcatg
ggattggacctcccagacgggggccacttaactcacggatacatgtctgatgtgaagagg
atctcagctacctccatttactttgaatccatgccgtataaactcaatccatccacagga
ttgatagactatgaccagctagaagtgacggctcgactgttccgcccccggatggtgatt
gctggaacaagcgcgtatgcacgtctcattgactatgccaggatgagaaaggtttgtgat
gaggtgagagcttatctgttggccgacatggctcatatcagcgggctggtttctgcaaag
gttgttccgtctccttttgaacatgccgatattgtgaccagcaccacacacaagacgctg
cgtggcgccagagccggtctgatattttaccgcaaaggcgtccagtcggtgaataagaag
accgggaaggaagtgatgtatgatttcgaggataagatcaactttgctgtttttccgtct
cttcagggtgggccccacaaccacgccattgctgctgttgctgttgccttaaagcaggtg
aattctgccatgttccgagaatatgcacagcaagttctgaaaaatgcaaaagcaatggca
gcatctttgaataagaaagggttcacgctggtgtcagggggcacagataaccacctcgtg
ttggtagacctgagacctaaaggcattgacggagctcgagctgagagggtgctagaattg
gtctccatcactgccaacaagaacacctgccctggagacaagagcgcactcacccctgga
ggactccgattgggggctccagctctcacctccaggcagttccgagaagcggattttgag
caggttgtagatttcatcgacgaagggatccagatcgctgtagatgtaaagatgaaaact
gctaagctgcaggactttaaaagtttccttttgaaggatgaggagacgaaggcaaagatg
gcggacctgcgccagcgtgttgagaagttcaccagggctttcccgatgcctggctttcag
gaccactaa
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