Latimeria chalumnae (coelacanth): 102355331
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Entry
102355331 CDS
T02913
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102355331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102355331
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
102355331
Prokaryotic type
Archaeal type
TFE
102355331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE-A_C
TFIIE_alpha
Zn_Ribbon_TF
Zn_ribbon_Elf1
DUF7836
Motif
Other DBs
NCBI-GeneID:
102355331
NCBI-ProteinID:
XP_006006478
LinkDB
All DBs
Position
Un
AA seq
419 aa
AA seq
DB search
MGDQEVLTEVPAALKRLAKYVVRGFYGVEYSLALDILIRYPCVKEDDLLQLLKFDKKQLR
AILNTLKLDKFIKCQMRIETLPNGKSMRCSYFYINYKLLVDVVKYRLDHVRRKIEADERD
STIRSSFQCPACLSSYTDLEVNQLFDPHTGTFHCTYCNTEVEEDTSGLAKRDASTLLARF
NEQIEPIYALLRETEDLLLPFDLLEPQPTEIPELALSSSANYNSFINLKGYVEKWSDKSS
TINDMYTQNVVIDGEDADSKMRVQEKPKAQPIWMSESTVNTTTTGAMECGASKYSDENVN
TKDTTVEEDEVIRTLLIHERKSALAPGGSLVSKINPSESGSDPSESEGETKKKKVEVTRP
ENAETEQEDEEEDPTVMVAGQPHLCSEVSQHPDLVSFMTEGEREVYIRVSQQMFQSMYD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccaagaagttctcactgaggttccagcagccttaaaacgtttagccaaatat
gtagtgagagggttctatggggtagaatactctcttgcccttgatatccttatcagatac
ccctgtgtgaaagaggatgatctgctacagctactaaagtttgataagaagcagctcaga
gcaattctgaacacgctgaagttggacaagtttatcaaatgccaaatgaggattgaaact
ctccctaatgggaaaagcatgagatgcagttatttctatatcaactacaagctgttagtg
gatgtagtgaagtatcgactagaccatgtgcgccgtaagattgaagcagatgaaagagat
tcaacgataaggtcttcctttcagtgcccagcatgcttgagcagctacaccgatttagag
gtcaatcagctctttgatccacatacaggaacttttcactgcacttactgtaatactgaa
gttgaagaggatacctcgggtcttgctaaacgagatgcttcgacacttctggccagattt
aatgaacagattgaacccatttatgcacttctgcgtgaaactgaagaccttctccttcct
tttgacctgctagaaccacagccaacagagattccagagcttgcattgagttcttctgca
aattacaactctttcataaacctgaaaggatatgttgaaaaatggtctgataaaagttca
actattaatgacatgtatacccaaaatgttgttattgatggtgaagatgctgactcaaaa
atgagagttcaggaaaagccaaaggcacaacctatttggatgtctgaaagtactgtgaac
acaactaccacaggagccatggagtgtggtgctagtaagtattctgatgaaaatgtaaat
accaaggatacaactgtggaggaagatgaagtaatccggaccctccttatccacgaaagg
aaatctgctcttgctccaggaggtagtttggtttctaaaatcaatccaagtgagagtgga
agtgaccccagtgaatcagaaggggagaccaagaaaaaaaaagtagaggttacaagacca
gaaaatgctgaaactgagcaagaagatgaagaggaggaccctacagttatggtcgctgga
cagccccatctatgtagtgaagtgagccagcatccagaccttgtatccttcatgactgaa
ggagagcgagaagtttatatccgtgtgagtcagcagatgtttcagtccatgtatgactga
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