Latimeria chalumnae (coelacanth): 102355334
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Entry
102355334 CDS
T02913
Symbol
GRIN2B
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04020
Calcium signaling pathway
lcm04080
Neuroactive ligand-receptor interaction
lcm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102355334 (GRIN2B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102355334 (GRIN2B)
04082 Neuroactive ligand signaling
102355334 (GRIN2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102355334 (GRIN2B)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
Glutamate (ionotropic)
102355334 (GRIN2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Lig_chan
Motif
Other DBs
NCBI-GeneID:
102355334
NCBI-ProteinID:
XP_014350619
LinkDB
All DBs
Position
Un
AA seq
1334 aa
AA seq
DB search
MRPMGLRQFLKVLLIIVSHVVTGSGAIKGSPSFGIAVIMVGTSDEVALKDAHEKDDFQYF
PVTPSVQLVSMNETDPKSIITRFCDLMSDKKVQGVVFGDDTDQEAIAQILDFISAQTLIP
IIGIHGGSSMIMADKDESSMFFQFGPSIEQQATVMLNIMEEYDWYIFSIVTTYFPGYQDF
VNKVRSTIENSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEANYIFE
VAHSVGLTGYGYTWIAPSLVAGDMDNVPTEFPTGLISVSYDEWDYGLSSRVRDGIAIITT
AASTMLKEHGFIPEPKSSCYNTQENMIYQSNVLNRFLINVTFEGRNLSFSEDGYQMHPKL
VIILLGAERKWERVGKWENGSLWMKYHVWPRFDLYFDNEEREDDHLSIVTLEEAPFVIVE
NVDPLSGTCMRNTVPCRKQIKQLNETEDHGIYIKRCCKGFCIDILKKIAKTVKFTYDLYL
VTNGKHGKKINGTWNGMVGEVVDKRAHMAVGSLTINEERSEVVDFSVPFIETGISVMVSR
SNGTVSPSAFLGNFQRPNDFSPPFRFGTVPNGSTERNIRNNYFEMHSYMVKYNQKGVHDA
LHSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKGIGWKRQVD
LAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFI
CEHLFYWQFRHCFMGVCSGKPGVLFSISRGMYSCIHGVPIEDKQSLMNSPSATMNNAHSN
ILRLLRTAKNMANLSGVNGSPQSALDFIRQESSVYDISEHRRSFAHSDCKSYQPEENMFS
DYISEVERTFGNLHLKDSNLYQDHYHHHHPRSIGSNSSLEGPYDCDNTPFTAQPRPVPRK
PLDIGLPPKHSQTPFNDIYGKLSFKSDRYGHDELIRSDVSDISTHTVTYGNIEGNAKRRK
QYRDSLKKRPASAKSRREFDEIELAYRRRPRSPDRKRYFRNKEGLRDLYLDQFRAKDNSP
HWEHVDLTDLYKERGEDFKHEPSRVNRPHHVHVGDFGANERKHGSSGALWEKNLSMADWD
DQQAVNYCRNCPSKLHNHSGQNAARSACIRCEACKKAGKLYDISEDNSLQELEQAPAPVA
PSKYPQSPSEPANLQKRGSRNKLRRQHSYDTFVDLQKEDSVNVAPRSVSLKDKDRFLEGS
PYAHMFEMPAEPVFAKKPSVPDHNPSGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGTKS
YFFRQQGGLKGRTDFRPNKTGSVLHSAIPARFPKDVCVGNQVNPCLPNNKNPRAFNGASN
GHVYEKLSSIESDV
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccatgggattgcgccagtttctgaaggtgctgctgatcattgtgtctcatgtg
gtgactgggtccggtgccatcaagggcagccccagcttcggcatcgctgtcatcatggtg
gggacctctgacgaggtggccctcaaggacgcccacgagaaagatgacttccagtatttc
cctgtcacacccagcgtccagctggtcagcatgaatgagacggacccaaagagcatcatc
acccgcttctgcgacctcatgtccgacaagaaggtccaaggggtggtctttggggacgac
acagaccaagaggccatcgcgcagatcttagattttatctccgcccaaaccctcatcccc
atcatcgggatccacggaggctcttccatgatcatggctgataaggatgagtcatccatg
ttcttccaatttgggccatccattgagcagcaggccacagttatgttgaacattatggag
gagtatgactggtacatcttctctattgtcaccacttacttccctggctaccaggacttc
gtcaacaaggtacgcagcaccattgagaacagctttgtgggctgggagctggaagaggtg
ctcttgttagacatgtccttggacgacggtgactccaaaatccaaaaccagctcaagaag
ctccagagcccagtcatcttgctctactgcacaaaggaggaggccaactacatcttcgag
gtggcccattccgttgggctgacgggctatggatacacgtggattgcgcccagcctggtg
gctggggacatggacaacgtgccaacggagtttccgacgggactcatttcagtgtcctac
gacgaatgggattacgggctgtccagccgggtcagggacgggattgccatcatcaccacg
gcggcctctaccatgctgaaggaacacggattcatcccggaacccaaaagcagctgctac
aacactcaggaaaacatgatctaccagtccaatgtgctgaacagatttttaatcaacgtc
acatttgaggggagaaacttatccttcagtgaggatggataccaaatgcaccccaaatta
gtcatcattctcctcggggcagagcggaaatgggagcgggttgggaaatgggagaacggg
agtttgtggatgaagtaccacgtctggccccgctttgacctttactttgacaatgaggag
cgagaggacgatcacctgagcattgtgacgctggaggaagcacccttcgtgattgtggag
aatgtggacccgctgagcgggacctgcatgaggaacactgtaccttgccggaaacagatc
aagcaactgaacgaaacggaggaccatggcatttatatcaagaggtgctgcaagggcttt
tgcattgacatcttgaagaagattgccaagacggtgaagttcacctatgacctctacctg
gtgaccaacggcaagcatggcaagaagatcaatggcacttggaacggcatggtgggagag
gtggtggacaagcgtgctcacatggccgtaggctccctaacgataaatgaagagcggtca
gaggtggtggacttctccgtccccttcattgagactggcatcagcgtcatggtgtcacgg
agtaatggaacagtatcaccctctgccttcctaggtaactttcagaggcccaatgatttc
tccccgccattccggtttgggacagtcccgaacggcagcactgagcgcaacatccggaac
aactattttgagatgcattcctatatggtgaagtacaaccagaagggagtccatgacgct
cttcacagcctaaagaccgggaaactggacgccttcatttatgacgcagccgtgctgaac
tacatggctggcagggacgagggctgcaagctggtgaccatcggcagcgggaaggtcttc
gccaccacgggatacggcattgccattcagaagggcatcggctggaagcggcaggttgac
ttggccatcttgcagctcttcggagacggagagatggaggaactggaagctctctggctg
acagggatctgccacaatgagaagaatgaggtgatgagtagccagttggacatcgacaac
atggcgggtgtcttctacatgctgggggcagccatggccctcagcctcatcaccttcatt
tgtgagcacctgttctattggcaattccgccactgttttatgggcgtctgctctgggaaa
cctggagtcctcttctccattagcaggggtatgtacagctgtatacatggggtgccaatt
gaggacaagcaatctctgatgaattcaccatctgccaccatgaataacgcccactccaac
atcctgcggctgctgcgcacggccaagaacatggccaacctgtcgggtgtcaacgggtcc
ccacagagcgccttggatttcatccggcaagagtcctccgtctacgacatctcagagcat
cggaggagctttgcgcactcagactgcaagtcctaccagcccgaggagaacatgttcagt
gactacatcagtgaggtggagaggacattcggcaacctgcacttgaaggacagcaacctg
taccaggaccactaccaccatcatcacccccgcagcattggcagcaacagctccttggag
ggcccatatgactgcgacaacacacccttcactgcccaacccaggcctgtgcccaggaag
cctctggacatcggtctacccccgaagcatagccagactccattcaacgacatctatgga
aagttgtccttcaagagtgaccggtacgggcatgacgagctgatccggtcggacgtctcg
gacatctccactcacacggtcacctacggcaatatagagggcaatgccaagcggcgcaag
cagtaccgggacagtctgaagaagcggccggcctcggccaagtcccggcgggagtttgat
gaaattgagttggcctaccgtcggcgcccacgctcaccagatcggaaacgttactttcgc
aacaaggagggcctgcgggacttgtacctggaccagttccgtgccaaggacaactctcct
cactgggagcacgtggacctgacagatctttacaaagaacggggggaggacttcaagcac
gagccctcacgggtcaaccggccccaccacgtccacgtaggcgattttggcgcaaatgag
cgcaagcatggatccagcggggctctgtgggagaagaacctctccatggcggactgggat
gaccaacaagcagtcaactattgtagaaactgcccttccaagctccacaaccatagcggg
cagaacgcggcacggtcggcatgcattcgctgtgaagcctgcaagaaagcgggtaagctg
tatgacatcagcgaggacaactcgttgcaagagttggagcaagcgccagccccggtggcc
cctagcaagtacccccagagcccttcagagccagccaatctgcagaagagaggcagtcgc
aacaagctacgtcggcagcactcgtatgacacttttgttgacctccagaaggaggacagc
gtcaacgtagcccctcgcagcgtcagtctcaaggataaagaccgattcctcgagggcagc
ccctacgcgcacatgtttgagatgccagctgagccagtctttgccaaaaagccctctgtc
cccgaccacaacccgagtgggtacatgcttagcaagtcactctaccctgaccgggtcacc
cagaatcccttcatacctaccttcggagatgaccagtgtttgctccatggtaccaagtcc
tacttcttcagacagcaaggtggcctgaaagggagaactgatttccgtcccaacaaaacc
ggctcagttctgcacagcgccataccagcccgctttccgaaggatgtctgtgttggcaac
caggttaacccctgtttaccaaacaataagaatccgcgggcgtttaatggcgccagtaac
gggcacgtgtacgagaagctatcaagcattgagtcagacgtctga
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