Latimeria chalumnae (coelacanth): 102355350
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Entry
102355350 CDS
T02913
Name
(RefSeq) low-density lipoprotein receptor-related protein 1B-like
KO
K20049
low-density lipoprotein receptor-related protein 1B
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102355350
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
102355350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
EGF
EGF_CA
FXa_inhibition
EGF_2
TMEM154
DUF3377
Motif
Other DBs
NCBI-GeneID:
102355350
NCBI-ProteinID:
XP_006010542
LinkDB
All DBs
Position
Un
AA seq
1094 aa
AA seq
DB search
EKTCGPHKFQCINKKCIPDHWRCDRHNDCGDNSDEENCTQPETCTLKDFVCANGDCIPAR
FRCDGDYDCADSSDETDCESGCSKDQFQCTDGQCIPAQWKCDGYENCKFGEDEDNCESDS
PTCSLDEYVCAGGGCILASFKCDGDFDCMDGSDENDCVMECKEDQFRCQNRAHCIPVRWR
CDGIYDCVDESDEDSCNIGHMCRDDEFLCNNTLCKLHAWVCDGEDDCGDNSDENPEMCVT
FQCPPNRQFRCRNDRVCLTPHQICNGIDDCGDNSDEEHCETVIQKQKPCGKDEFACGNRK
CIPAELLCDLFDDCGDGGSDEQICKKHPSEDTCGGDVNPCGDDAFCNQNKETVSCQCKPG
FQRNSKNKHCEEIDECLQFGICSQYCTNSKGSYKCTCDKNYKEQNSSCIARDSKDQVLYV
ASDTEIRSFAYPFNHSEGYQQVSRVEENSIITGMDVYYQGHKIIWSTHFNPGGIFHKRII
GSGQRHTDSGLICPEFKRPRDVAVDWVAGNVYWTDHSRMHWFSYYTTHWTSLRYSINVGQ
FSGSNCTRLLTNIAGEPHAIAVNPIKGMLYWTVIGDHSHIEEAAMDGTMRRIIVQKNLKR
PTGLAIDYFSDRLYWSDSELSIIGSVHFDGSAFVVAITNKHGLLHPYRIDIFEDYIYGAG
LNNGVFKVQKFGQGLVEYLDLGIDKVKNVLVSHRHKQQEITNPCTKMNCEYLCLLNPKGA
TCSCPEGKSSANGTCSDTGVSDHSCRLTCENGGRCIRNEKGDPRCLCWPNYSGERCEINH
CTNYCLNGGTCIGSDVGKPACHCAIGFTGPNCGLQVCEDFCQNDGVCKVSAGNQPYCHCP
PDYTGDRCQHYICRHYCANSDSCTLANDGSIHCVCPPRFEGPKCELDKCVRCHRGQCIID
EDTGDVICNCTNGRIASSCQLCDSYCYNGGTCQLDSDTNTPVCMCSANWSGTQCERPAPK
SSKSDNTSARSIAIIVPLVLLVTLITTLVIGVLLCKRKRRAKGVQRQPMTNGGMSVEIGN
PSYNMYEVEHDHSDGGFLEPVFTMDPNKPTNYSNPVYAKLYLDGQNCRNSLVRVDERREL
LPKKIELGIRETVA
NT seq
3287 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacatgtggaccccataagttccagtgcatcaacaaaaaatgtattccagatc
actggagatgtgaccgccacaatgactgtggagataattcagatgaggagaactgcacac
aacctgagacatgcactctgaaagactttgtctgtgccaatggggactgcatccctgcac
gattcaggtgtgatggagattatgactgtgctgatagctcagatgagacagattgtgaat
ctggttgttcaaaagaccagttccagtgtacagatggtcaatgtataccagcacagtgga
aatgtgatggctacgaaaactgtaaatttggggaagatgaggacaactgtgagtcagatt
ctccaacctgttccttggatgagtacgtctgtgccggtggaggctgtattttggcaagct
ttaagtgtgatggagattttgactgtatggatggctcagatgagaatgactgtgtgatgg
aatgtaaagaagatcagttccgatgtcaaaatagggcccattgcattcctgttagatggc
gatgtgatggcatctatgactgtgttgatgaaagtgatgaagactcttgtaacataggac
atatgtgtagagatgatgaattcctctgtaacaacacactttgcaaactccatgcttggg
tctgtgatggagaggatgattgtggggataactcagatgaaaatcctgaaatgtgtgtaa
catttcagtgcccaccaaacagacagttcagatgtagaaatgacagagtctgtctgacac
ctcaccaaatttgcaatgggattgatgactgtggtgacaactcagatgaggaacattgtg
agacagtgatacaaaagcagaagccctgtggaaaggatgagtttgcctgtggtaatagga
aatgtatacctgcagagctgctttgtgatctttttgatgactgtggggatggtggttctg
atgagcaaatttgtaaaaaacatcctagtgaagacacctgtggaggggatgtgaatcctt
gcggagatgatgccttctgtaatcaaaataaagaaactgtttcatgtcagtgcaagcctg
gcttccaaagaaacagtaagaataaacattgtgaagaaattgatgagtgcctgcagtttg
gtatttgttcccaatattgtactaacagcaaaggttcatacaagtgtacatgtgacaaaa
attacaaggagcaaaacagcagctgcatagcaagagactccaaggatcaagttctctatg
tcgccagtgatacagaaatacggtcttttgcttatccatttaaccatagtgaaggatatc
agcaagtgtctcgcgtagaggagaattcaataataacgggaatggatgtgtattatcagg
ggcacaagattatctggagtacccatttcaatccaggaggcattttccataaaagaatca
ttggtagtggacagagacatacagatagtggtttaatttgccctgaatttaaacgaccaa
gagatgtagcagttgattgggttgctgggaatgtctattggacagatcactcacgaatgc
actggttcagctactatacaacacattggacaagtttgagatactccataaatgtagggc
agtttagtgggtcaaactgtacaaggctcttaactaacatagctggagaacctcatgcta
ttgctgttaatccaatcaaaggaatgttgtactggactgtcattggtgatcactcacaca
tagaagaagcagctatggatggcactatgagaagaataatagttcaaaagaacttaaaaa
gacctacaggacttgcaattgactatttcagtgaccgattgtattggtctgattctgaac
tatctattattggcagtgttcactttgatggttctgcttttgtggttgctattaccaata
aacacgggcttttgcatccatacagaatagacatttttgaagattatatttatggagcag
ggttaaataatggtgtatttaaagtgcaaaagtttggtcaaggcctagtggaatacttgg
acttgggtattgataaagtcaaaaatgtgcttgtctcccatcgtcacaagcaacaagaga
taacaaatccctgcactaaaatgaactgtgagtatctctgtttactaaacccaaaagggg
caacttgctcttgtccagaaggaaaatcatctgctaatggaacttgcagtgatactggtg
tttcagatcattcatgtcgattaacatgtgaaaatggagggagatgcattagaaatgaga
aaggagatccacgatgcctttgttggcccaattattcaggagagaggtgtgaaatcaatc
actgtactaattactgtctgaacgggggaacctgtataggatcagatgtaggaaaaccag
cttgccactgtgcaataggattcacaggtccaaattgtgggttgcaggtctgtgaggatt
tctgtcagaatgatggtgtttgtaaagtgagtgcaggaaaccaaccctattgccactgcc
cacctgactacaccggggacaggtgtcaacattatatatgtcgtcactactgtgcaaatt
cagattcctgcacacttgctaatgatggaagtattcattgtgtttgcccgccacgatttg
aaggacctaaatgtgagctggacaagtgtgtgcgatgtcatcgtggacaatgcattattg
atgaagatactggagatgttatctgcaactgtactaatggaaggattgcatctagctgcc
agttatgtgacagctactgctataatggtggtacttgtcagctggactcagatactaata
cacctgtttgcatgtgttcagccaactggtcaggcacacaatgtgagaggccagctccca
agagcagcaagtctgacaataccagtgcaagaagcattgcaatcattgttccgcttgttc
ttttggtgactctaatcactactttagtaattggtgtcctgctttgcaaaaggaaacgac
gggcgaaaggtgttcaaaggcaaccaatgacaaatggtggaatgagtgtcgaaattggta
atccatcctataacatgtatgaagtagaacatgatcacagtgatggaggctttctagaac
cagtctttacaatggatccaaacaagcctaccaactactctaatccagtgtatgcaaagt
tgtacctagatggacagaattgtcgaaattccttagtcagggtggatgaaaggagagaac
ttcttccaaagaaaatagaattgggtataagggaaacggtggcatag
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