KEGG   Latimeria chalumnae (coelacanth): 102355438
Entry
102355438         CDS       T02913                                 
Symbol
PWP1
Name
(RefSeq) PWP1 homolog, endonuclein
  KO
K14791  periodic tryptophan protein 1
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcm03009]
    102355438 (PWP1)
Ribosome biogenesis [BR:lcm03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    102355438 (PWP1)
  Pre-60S particles
   Other pre-60S particles
    102355438 (PWP1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_Prp19 WD40 WD40_Gbeta Beta-prop_RIG_2nd WD40_WDHD1_1st EIF3I Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd WD_LRWD1 Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40
Other DBs
NCBI-GeneID: 102355438
NCBI-ProteinID: XP_014340113
LinkDB
Position
Un
AA seq 354 aa
MSCQITCVSWIGRGIAKKTPDKVQLSKEELQRLISEARDQIVNDVKDEEEDVSNAAEEEM
VSTAGTEPQQEEEEDADKLNDDDLAEYGLDKYDEETDAVNLGDSLAGLAVYGNNEDDPYV
TIKNTEQYESEDFQIKPTDNLIVAGRAERDCCNLEIHVYNQEEESFYVHHDILLPAYPLC
VEWLNFDPNPEESQGNYVAVGNMTPVIDVWDLDVVDCLEPVFSLGNKKTKRTKKKGKKSG
EESHEGHSDAVLDLSWNRQVRNVLASASADSTVILWDLTRGKTAATFSKHTDKVQTLQFH
PFEAQTLISGSFDKSAILYDCRCPQENCRTWRFSGQVERVAWNHFSPFNFLVRP
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgagttgtcagattacctgcgtgtcctggataggcaggggaattgctaaaaagacacct
gacaaggtgcagttaagtaaggaagaactgcagcgacttatcagtgaagcaagagatcaa
attgttaatgatgtaaaagatgaggaagaagatgtgagcaatgcagcagaagaagagatg
gtcagtacagcagggactgagcctcagcaagaagaagaggaagatgctgacaaactaaat
gatgatgacctagcagaatatggtctggacaaatatgatgaggagacagatgctgtgaac
cttggtgacagtctggcaggtctagctgtttatggcaacaatgaagatgatccctatgtt
accattaagaatactgaacaatacgagagtgaagactttcagattaaaccaaccgataat
ctgatagttgcaggaagggcagaacgagactgttgtaacctagagatacatgtttacaat
caagaggaagaatctttttatgtgcatcatgatatcctcctgcctgcatatccactgtgt
gtagagtggttgaactttgaccccaatccagaagaatctcaaggaaactatgttgcggtg
gggaacatgacccctgtcattgacgtatgggaccttgacgttgttgattgtcttgagcca
gtgttttctcttggaaataagaaaaccaaaaggacaaaaaagaagggcaagaagagtgga
gaggaaagtcacgaaggacactctgatgcagttcttgatctttcatggaacagacaagtc
agaaatgtattagcaagtgcttctgctgatagcactgtaattctgtgggatctgactcga
ggaaaaacagcagcaaccttttcaaaacacacagacaaggtccagactctacaatttcat
ccatttgaagcccagactttgatttctggatcttttgacaagtctgcaatactctatgac
tgcagatgtccacaggagaactgtcgtacttggaggtttagtggtcaagttgagagagtt
gcatggaatcatttctcccctttcaactttttagtaagaccatag

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