Latimeria chalumnae (coelacanth): 102355477
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Entry
102355477 CDS
T02913
Symbol
DHX36
Name
(RefSeq) DEAH-box helicase 36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102355477 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102355477 (DHX36)
03012 Translation factors [BR:
lcm03012
]
102355477 (DHX36)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102355477 (DHX36)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102355477 (DHX36)
Translation factors [BR:
lcm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102355477 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
AAA_23
AAA_14
PhoH
TsaE
NB-ARC
AAA_7
Corona_NS2A
ABC_tran
NACHT
Motif
Other DBs
NCBI-GeneID:
102355477
NCBI-ProteinID:
XP_005996531
Ensembl:
ENSLACG00000016218
UniProt:
H3B942
LinkDB
All DBs
Position
Un
AA seq
974 aa
AA seq
DB search
MSYGGNRRGWRGGNSSGGFGRGASEAFGHAREDGGGRGRHPAHLKGREIGLWYAKKQGQK
CREKERSERAVVQMDESREEQITQLLSSVSSRSNDKKLPSSTLHATTRNERSTDNPVLGE
RSTIDYWDQDPDYTFQDNIPDLHLDRQLKDDLLKKKSDPRYIEMQRFRETLPSYRMRKEI
VELINNNQVVVISGETGCGKTTQVTQFVLDDYISRGVGSACRVACTQPRRISAISVAERV
AAERAEVCGSGNSCGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSYLSSVSHVVLDEI
HERSLQSDVLITIVKDLLKFRSDLKVVLMSATLNAEKFSSYFDNCPMIHIPGFTYPVQEY
LLEDVVEMLRYCPQNQDQRAQWKRRFMQGQMWRPEKEEKEEEYGLQWPDYLKRLRGRYST
TTIEALEMLNGDEKIDLNLIVALIKHIVLKGEDGAILVFLPGWDNISTLNDLLMAEVMFK
SDKFIIIPLHSLMPTVNQTQVFKKPPPGVRKIILATNIAETSITIDDVVHVIDGGKIKET
HFDTENNISTMTAEWVSLANAKQRRGRAGRVQPGHCYHLYNGLRACLLDDYQLPEIQRTP
LEELCLQIKILKLGKIGSFLKKVMEPPAEKATELAITHLIELNALDKSEELTPLGFHLAR
LPVEPHIGKMILFGSLLCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKDSKSD
HLTIVNAVLGWEEARRRGFKAERDYCWEYFLSSNTLQMLHNMKGQFAEHLLAAGFICSKA
PKDPKSNINSDNEKLIKAVICAGLYPKVAKIRPNFSKKRKTVKVYTKPDGKVSIHPKSVN
VEETEFHYSWLIYHLKMRTSSIYLYDCTEVSPYSLLFFGGDISIQKDQDQETISVDEWIV
FQSPARIAHLVKDLKRELDALLQEKIENPQSVDWKNTQSRDCAVLSAIIDLITTQESGTA
KNFAPRFRGGYYNS
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggaggaaaccggcgaggctggaggggtgggaatagctcgggtgggtttgga
agaggggcttcggaggcttttggccacgctagagaagatggaggaggccgggggcgccat
cctgcccacctgaaaggcagggagattgggctgtggtatgccaaaaaacagggccagaaa
tgcagagagaaagagagaagtgagagagctgtggttcagatggatgaatccagagaagaa
cagattacacagcttctgagctctgtcagttcaaggagtaatgataaaaaattgccttcc
tcaacattgcatgccaccactaggaatgaaagaagtacagataatcctgttttaggggaa
aggagcaccatagattattgggaccaagaccctgattatacgtttcaagataacattcca
gatttacatttggatcgacagctgaaagatgaccttctaaaaaagaagtctgatcccaga
tatattgaaatgcagagattcagggaaacacttccttcatatcgcatgagaaaggaaatt
gtggagttgatcaataataaccaggtggttgtaataagtggagaaactggctgtgggaag
acaacccaagtgactcagttcgttctggatgactatatttccagaggagtgggctctgct
tgtcgagtcgcatgtactcagccaaggaggatcagtgctatttctgttgcagaaagagtg
gctgcagaaagagcagaggtctgtggcagcgggaacagttgtggatatcaaatccgtctc
cagagccggttgccaaggaaacagggttccatcttgtactgtactacaggcatcatctta
cagtggctgcagtcagactcttatttgtcttctgtaagccatgttgtcctcgatgagatt
catgaaagaagcctacagtcagatgttttgatcacaattgtaaaagaccttttaaaattt
cgatctgatctgaaggttgtgttgatgagtgcaactttaaatgctgagaaattttcatct
tactttgataactgcccaatgatacacatccctgggtttacctatccagttcaagagtac
cttttagaagatgtcgttgaaatgttacgatattgtccgcaaaatcaagatcaaagggct
cagtggaaaaggaggtttatgcagggccaaatgtggagaccagaaaaagaggaaaaggag
gaggagtacgggctgcagtggccagattatctgaagcgtcttcgaggaaggtattcaaca
actaccattgaagctttggagatgttgaatggagatgaaaaaattgacctcaatctgatt
gtagctctgatcaagcatattgtgttgaaaggagaggacggtgcaatattggtattcctg
ccaggctgggataacatcagtactttaaatgatctattgatggctgaagtcatgtttaaa
tcagataagttcatcatcattcctttgcactcattgatgcctacggtaaaccagactcag
gtttttaaaaagcctcctccaggagttcgaaaaattattcttgctacaaatattgcagag
acaagtatcacaatagatgatgtggtacatgttattgatggagggaaaataaaagaaaca
cactttgacactgaaaacaacatcagcacaatgacagcggagtgggttagtctagccaat
gccaaacagagacgaggtcgagcaggacgtgtacagccaggtcattgttatcatctatac
aatggattaagagcctgtctactagatgattatcaactaccagagatccagagaactcca
ctggaggagctttgcttacagatcaagattttaaaacttgggaaaatcggttcttttttg
aagaaagtaatggaaccacctgcagaaaaagcaactgaattggcaattactcatctcata
gaactgaatgcactggacaaaagtgaagaactaactcctctaggtttccatttggctcga
ttgcctgtggagcctcacataggaaaaatgattctttttggatcgttgttgtgttgttta
gaccctgtcctgacgattgctgctagtctcagtttcaaagacccctttgtgattccattg
ggcaaagaaaaagtagctgatgcaagaagaaaagaactgtcaaaagattccaaaagtgac
catttaactattgtgaatgcagtgctgggctgggaggaagcaagaagacgtggtttcaaa
gcagagcgagactactgctgggagtactttctgtcttcaaacactctccagatgttgcat
aacatgaaaggacagtttgcagaacacctactggcagctggatttatctgcagcaaagcc
cccaaagatccgaaatcaaatatcaactcagacaatgagaagttaatcaaagctgttatc
tgtgctggcttatatccaaaagttgcaaagattcgaccaaatttcagcaaaaaaaggaag
acggtgaaggtttatacgaagccagatggaaaggttagcattcatcccaagtcagtgaat
gttgaagagactgaattccactacagctggctcatttatcatctgaagatgagaactagt
agtatttatctgtatgattgtactgaagtttccccatactcccttctgttttttggaggc
gatatttcgattcaaaaggatcaggaccaagaaaccatctctgtggatgagtggattgtc
tttcagtctcctgcccggatagcacatctagttaaggatttaaagagagaattagatgct
cttctacaggagaagattgaaaaccctcagtctgttgactggaagaatacccaatccaga
gactgtgcagtgctgtcagcaattatagatctcataactacacaggagagtggaactgcc
aaaaactttgcccctcgatttcgaggaggatattacaattcttaa
DBGET
integrated database retrieval system
