Latimeria chalumnae (coelacanth): 102355498
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Entry
102355498 CDS
T02913
Symbol
NCSTN
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102355498 (NCSTN)
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Paralog
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Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
GO-like_E_set
Motif
Other DBs
NCBI-GeneID:
102355498
NCBI-ProteinID:
XP_014347416
Ensembl:
ENSLACG00000009662
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All DBs
Position
Un
AA seq
679 aa
AA seq
DB search
MATLGMKLPQTGSLISFLGFSYIFLLIGLSSSNSVERKIYIPLNYTAPCVRLLNATHQIG
CQSSINGDTGVIHVVEKEEDLQWVLKDGPNPPYMVLLEGDLFTREVMLKLKDTRRVSGMA
VVISKPNPAGGYSPDLRCPNDGFGAYSPTHSPELAHCNGTVWNPFGNGLSYEDFKFPIFL
LKDENETQVIKQCYLEHNIPVNGSAPKFPLCAMQLFSHMLAVTDTVTCMRRNSIQARFNL
NPEMLCDALGDYNVWSVVKPINNSGTAEPEEKFILAATRLDSRSFFWDIVPAAESTVSGF
VTLLAAAQTIQKLPDVQSLKKNIMFVFFQGETFDYIGSSRMVYDMEQGKFVLNLDNIDSF
LELSQVGFSSNFSLWAHSDPVSRRNATINQQVMDLVSVVQNSSAGTNITVAEPPNSQALP
PSSFQRFLRARNIPGVVLTDHKSSFSNRYYQSVYDTAENLLLKYPRELSPEEALNHVTDV
AESLTEVATTVARTLYLLAGGTQRPSMIKADPLTFSGNTPLWYYVSVSSPATPTRLVQYV
LANLTGTATDLTKDQCQNPTKDAGAEKDLYDYIWVQGSSSENSSEPTPFCVETTVRLSKA
LSPAFELKEWGSTEYSTWTESRWKEIRARIFLIASKELEIITLIVGLVILVVSLVGIYFI
NAKVDVLFTSAREPSTVAY
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgctggggatgaaacttccccaaacaggaagtttaatttcatttttagggttt
tcttacatctttttgctgattggactgagttccagtaattccgtggaaagaaagatttac
attccactaaactatactgccccctgtgtccggcttttgaatgcaacacaccaaatcggg
tgtcagtcttccattaatggagacacgggagtgatccatgttgtggagaaggaagaggat
ttgcagtgggtattgaaagatggacccaatcctccttacatggtgttgctagaaggagac
ctttttaccagggaggtgatgctgaagctgaaagacacccgccgtgtctcggggatggct
gtcgtcatttctaaacccaatcctgctggaggttattccccagatctccgctgtcccaat
gatggctttggtgcctattctcctacacatagccctgagcttgcccactgtaatgggact
gtctggaacccctttggcaacggcctatcttatgaagatttcaagtttccaattttcttg
ctaaaagatgagaatgaaacgcaagtcatcaaacagtgctatcttgaacacaatattccg
gtgaacggctcggctcccaagttcccgctgtgcgcaatgcagctcttctcccacatgctg
gcggtgaccgacacggtgacgtgcatgcgacgcaacagcatccaggctcgctttaacctg
aaccccgagatgctttgcgacgcactgggtgactacaatgtgtggagtgtggttaaaccc
atcaacaattccggaacggctgagcctgaagagaaattcatcctagcagcgactcggttg
gacagccgttctttcttctgggacatcgttcctgcagcagaaagcactgtcagtggattt
gtcaccttgttggctgcagcccagacaatccagaagctccccgatgtccagtcgctgaag
aaaaacatcatgtttgtcttctttcagggggagacctttgattacattggcagctctcgg
atggtgtacgacatggagcaagggaagtttgtattgaacctggacaatatcgactccttc
cttgaactcagtcaggttggcttcagtagcaatttctccctctgggctcactctgacccc
gtctctcggaggaacgccaccatcaatcagcaagtgatggatttggtctctgtggttcag
aacagcagcgccggcaccaacattactgtggcagagcctccaaactctcaggccctcccg
ccctcgtccttccagcgtttcctccgggcacggaatatccctggggtcgtcttaacagat
cacaagtcctccttctcaaacagatattatcaaagtgtgtacgatactgcggagaacctc
ctgctgaagtatcctcgtgagctgagcccagaagaagctctaaaccatgtgacagatgta
gcagagtctctgacagaagttgctaccactgtcgctcgtaccctctacctgctggctgga
ggaactcagaggccatcgatgattaaagccgaccccctcacgttctcaggcaacacacct
ctttggtactacgtttctgtttccagtccagctaccccgacccggctggtccagtatgta
ctggccaacctcactggtaccgccaccgatttaacaaaagaccagtgccagaacccgacc
aaggatgctggagctgaaaaagatttgtatgattacatttgggtgcagggctcctccagt
gagaattcctccgaacccaccccattttgcgtagagacaacagtgcgcctgtctaaggcg
ctgtcgcccgcctttgagctgaaggagtggggctccacggaatattccacctggaccgag
agccgctggaaagagataagagccagaatattcctcattgccagcaaagagctagagata
attaccctgattgttggactagtgattcttgttgtctccttggtggggatctatttcatc
aacgccaaagtggatgtcctgttcacgtctgcccgtgagcccagcaccgtggcctactga
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