Latimeria chalumnae (coelacanth): 102355854
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Entry
102355854 CDS
T02913
Symbol
PEX1
Name
(RefSeq) peroxisomal biogenesis factor 1
KO
K13338
peroxin-1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102355854 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102355854 (PEX1)
Membrane trafficking [BR:
lcm04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
102355854 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
AAA_22
nSTAND3
AAA_5
RNA_helicase
AAA_33
RuvB_N
TIP49
DUF815
AAA_18
Sigma54_activat
AAA_28
nSTAND_NTPase5
NACHT
AAA_29
ABC_tran
Sigma54_activ_2
AAA_19
AAA_7
FtsK_SpoIIIE
APS_kinase
ATPase_2
KTI12
DUF87
Zot
Motif
Other DBs
NCBI-GeneID:
102355854
NCBI-ProteinID:
XP_014347945
Ensembl:
ENSLACG00000010431
LinkDB
All DBs
Position
Un
AA seq
1294 aa
AA seq
DB search
MLSDSGCFAVALKFTNSKNCFVYLPSHLVSQLHLQEGQAVELSWDFRRSAFLSWVRHAGF
CDEKEIGINRHLGEKLGLTDGEEVLLRACTQVSSCLQVVVEPLTADDWEILELHSSSLET
HLLDQIRIVFPQAVFPVWVEQHTLIYIKVGSLIPAATYGRLEPLTELLVSPKLRGSASVS
SHPPSSKGTGLNRRARKSNLNHGYVEKHSPRQTFQESRATESCDSRGSDRQDAHRSRDVP
RPSLLSGFWSFVSQAFYGTSKEQQVLERDRLTSIENALRFLDTALVFRVCRSVPFHLDLK
DSSAVSLVQTLPSSVCIFPWNQEFLDTEGSRAVTYGKLSKLLSPRQQKEETKQSLSMLDK
RKAAETSGSTRQSATSQGQDDDSAASFVVKVLCYGFADLKTMKACSKNSTALHVGNVWIP
EHLRQRVNIDLSAAVVIRPLEYIPLVPALVKLQPIETLLPDASEEELKSAFASWLQVSST
DNLPWLTAKTNSVSLLVKERVTEFAFSAEPSPGNVQTKSDGVFMLSPSLLQKTNIQTHKC
SIVAAREDFHSRIQHAQWNCDALVSVGVQETSSSAFEHINHSLLGSPLSRELASFTLGIC
HGALLLTGAKGSGKSTVARAICREAADKLDAHVEIIDCKALRGKRLENIRKKLKEAVAEA
AWRQPSVVLLDDVDQVAGAALAPEQEQGPEAVLSRQLAQAVKDMVTEVTSQRNLISVIAT
SLSEQSLHSSLISAQGTHLFQWHRDIQPPNQEQRIELLRCVVRNKTNVGVETMQSLDLES
LAKQTEGFVARDFAALVERAVHAFLSNNRDCTDQVSEFSLSTSDFQRALKGFLPSSLRNA
ELHKPENLSWDRVGGLREVKQLLVDTIQLPAKYPVLFANLPIRQRSGILLYGAPGTGKTL
LAGVVAQESGMNFISIKGPELLSKYIGASEQAVRDIFSRAQAAKPCILFFDEFDSLAPRR
GHDNTGVTDRVVNQLLTQLDGVEGLHGVYVIAATSRPDLIDPALLRPGRLDKSVYCPPSD
KVARLEILKALSQSLPLGDDVDLQQIAVLAECYTGADVKALLYNAQLEAVHSSQAVAGPQ
DAGLGSDSDGSLSSMIFLNNSSGSDDSTGDPEGGLEQSLVYLDTSELLPEDPQQNIWRLY
FGSSYESELENGVASGMNSQCQSGPNSMTHELTGTSIRDTVSSHPPAFMASLQEGFQELS
QEQMEQLRAEIGTIKANCKNRTMEDMSLNQTVQTKTSLTVCQSHLLTALTTTRPSISQDE
WKKWTDLYSNFQRSQDGKDQGGFTLRAGQKVTLA
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtgacagtggctgttttgctgtggctcttaaatttactaacagcaaaaactgc
ttcgtatatctgccttcgcatctggtttcacagcttcacctacaggagggccaagcagtg
gagctgtcttgggacttccggcgatcagcgttcttgagctgggtgaggcatgctggtttc
tgtgatgagaaggaaattggcattaacaggcatctgggagaaaaacttggattaacagat
ggagaagaggtgcttctccgggcctgtacccaggtttcgtcctgtctgcaggtcgtggta
gaacccctcacagctgatgactgggaaatactggagcttcatagttcatctcttgaaacg
catctcctggaccagattagaattgttttcccacaggctgtttttccagtctgggtagag
cagcacacactcatttatattaaagttggttctcttatccccgccgccacctatggcaga
ctggagcctctgactgaactcctggtctcccctaagctgagaggttccgccagcgtctcg
tctcatccgccatctagtaaaggcaccggcttaaaccgaagagccagaaaaagcaacctg
aaccatggctacgtagaaaaacactcgcccagacaaacattccaggaatcacgtgccaca
gaatcgtgtgacagccgaggaagtgacaggcaagatgcccacagaagccgggatgtccct
cgacctagtttgctatcaggattttggagttttgtaagccaagcattttatggtacttcc
aaagaacaacaggtacttgaacgtgataggttaacttccattgagaatgcattaagattt
cttgacacagccttagtgtttcgagtttgtaggtccgtgccttttcacttggacttaaaa
gactcttcagcggtgtcacttgtacagacacttccaagtagcgtttgcatttttccgtgg
aaccaagagttccttgacacggaaggctcccgtgctgtgacgtatggaaaactgagcaaa
cttttgtcaccaaggcagcagaaagaagagactaagcagagtctgtccatgctggataaa
aggaaagcagctgagaccagtggaagcacaaggcagtcggcaaccagccaaggccaagac
gatgacagtgctgcctcctttgttgtgaaggttctgtgctatggatttgcagacttgaag
actatgaaagcctgcagtaaaaatagcacggcattgcatgtcggaaatgtttggatccca
gagcatctgaggcagagggtaaatattgacctttcagcagctgtcgtaataagaccactg
gaatacattcctctcgttcctgctctagttaagctacagcccatagaaacgttgctgcca
gacgcttccgaagaggagctcaaatctgcctttgcttcctggctgcaagtctcctccact
gataacctaccctggttaacggcaaaaacaaactctgtcagtttacttgtgaaggaaaga
gtgacggagtttgccttcagtgcggaaccatctccaggaaatgttcaaaccaaatcagat
ggtgtctttatgttgtcacctagtttactccagaagacaaacatccagacacacaagtgc
agcattgtagccgctcgggaagactttcattccaggattcagcatgcacaatggaactgt
gatgcactggtgtctgtaggtgttcaggaaaccagttcatcagcgtttgagcatataaac
cacagcctactgggcagtcctctgtctcgggagctggcttctttcactctggggatttgc
catggagcacttttacttacaggtgcgaagggaagtggaaagtcaactgtagccagagcg
atctgcagagaagcagctgataagctagatgcacacgtggagatcattgattgtaaagca
ttaagaggtaagagattggagaatataagaaaaaagctcaaagaagctgtcgccgaggca
gcgtggagacagccgtcggtcgtcctgctggacgatgtggatcaggttgcaggagctgcg
ctcgctcccgagcaggagcaagggcccgaggctgtgctcagccgacaacttgcacaggct
gtgaaggacatggttacagaagtgacgtcccaaagaaatctaatttctgtgatagccaca
agcctctctgagcaatctctacactcgtccctcatatctgctcagggcactcacttattt
cagtggcacagggatattcaacctccaaatcaggagcaaaggatagaattattgcggtgt
gtagttcgaaacaagactaatgtcggagtggaaacaatgcagtctcttgacttggagtcg
ctggccaaacaaacagaagggtttgtggctcgagattttgccgcgctagtggaacgagct
gtccatgcgtttctgtctaacaacagggactgcacagatcaagtttcagagttctctttg
tcaacatctgactttcagcgagctctcaaaggctttctcccctcctcgctgcgaaacgcc
gagctgcacaaacccgagaatttgagctgggacagagtcgggggcctacgtgaggtcaag
cagctccttgtggacaccatccagctgccagcaaaatatccagtcctatttgcaaaccta
cctattcgccagcggtcaggaattttactttatggagcacctgggacagggaagaccctg
ttggcaggcgtagttgctcaagagagtggcatgaatttcattagcattaagggccctgaa
ctgctcagcaaatacatcggcgcaagtgagcaggctgttcgagacattttcagcagagcg
caggcagccaaaccttgcattctgttttttgatgaatttgattctcttgcccctcgtcga
ggtcatgacaacactggtgtaactgaccgagtggtaaaccaactgctgactcagctggat
ggggtagaaggattacacggtgtttacgtaatagctgccaccagccgccctgatctgatt
gaccctgctctgctcaggcctggccgcttagacaagtccgtgtattgtccaccttcagac
aaggtggctcgtttggagatcttgaaagctctgagtcagtctttgcccctgggggacgac
gtggaccttcagcagatagcagtgttggcggagtgttacacgggagccgacgtgaaagcg
ttgctctacaatgcccagctagaggcagtccacagcagccaggcggtagctggacctcag
gacgcaggcttgggctctgacagtgatggaagcctgtcctcaatgatcttcctgaacaac
agcagcggctctgacgactcgacgggggacccggaaggagggctggagcagtcgctggtt
tacctggacacttctgaacttcttcctgaggaccctcagcagaacatctggcgcctttac
tttggcagctcctatgagtcggagctagagaacggggtagcttctggaatgaactcccag
tgtcagtctggcccaaactcaatgacccatgagctcacaggcacctcaataagagacaca
gtatcatctcatccaccagcattcatggcatctttacaagaaggtttccaggaactgagt
caggagcaaatggaacagctcagggctgagatcggcactataaaagccaactgcaagaac
agaactatggaggacatgtctctcaaccagacagtgcagacgaagacttccttaacagtt
tgccagtcccatcttctaacagcactgacgaccacaagaccatctatcagccaagatgaa
tggaaaaaatggactgatctctatagtaacttccaaaggtcccaggatggaaaagatcaa
ggtggattcactctccgagctggacaaaaagtaaccctggcatag
DBGET
integrated database retrieval system
