Latimeria chalumnae (coelacanth): 102356074
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Entry
102356074 CDS
T02913
Symbol
APEX1
Name
(RefSeq) apurinic/apyrimidinic endodeoxyribonuclease 1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102356074 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102356074 (APEX1)
Enzymes [BR:
lcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102356074 (APEX1)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102356074 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
102356074
NCBI-ProteinID:
XP_006009923
Ensembl:
ENSLACG00000008617
UniProt:
H3AJF3
LinkDB
All DBs
Position
Un
AA seq
314 aa
AA seq
DB search
MPKRGKKEKVGNGEEVQDAVAEPKAKKTKKESGSEAKGTGMYEDPPDKLTSTDGKTANWK
ITSWNVDGLRAWIKKNGLDWVREENPDVLCLQETKCAEKALPDDIKNMPEYPHKYWACSD
DKEGYSGVAMLCKNKPLNITYGIGIEEHDKEGRVITAEFDRFFLVTAYIPNAGRGLVRLE
YRQQWDVDFRAYLKSLDARKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTKEERDGFTTL
LAEGFIDSFRHLYPDAPYAYTFWTYMMNCRAKNVGWRLDYFVLSEPLVANLCDSKIRSKA
MGSDHCAITLYMAI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgagggaagaaggagaaggtggggaatggagaggaggtgcaggatgcggtt
gcagagcccaaagcaaagaagaccaagaaggaaagtgggagcgaggccaaggggacgggg
atgtacgaagaccctccggacaaactgaccagcaccgacgggaagacggccaactggaaa
atcacatcctggaacgtggacgggctgcgggcctggatcaagaagaacggcttagattgg
gttcgggaggagaatcctgatgttctctgtctccaggagaccaagtgtgcggagaaggct
ctacccgatgacatcaagaacatgccggagtacccgcacaagtactgggcgtgctccgat
gacaaggagggctacagcggggtagccatgctgtgtaagaacaaaccactcaacatcacc
tacgggatagggattgaagagcatgacaaggaaggtcgagtgatcacagcggaatttgac
cgtttcttcctggtcaccgcctacatccccaacgctggccgtggcctggtgcgcctggag
taccgccagcagtgggacgtggacttccgggcatacttgaagtcgctggatgcccgcaag
ccactggttctctgtggtgacctgaacgtggcgcaccaggaaatcgacctgaagaacccc
aagggcaacaagaagaatgccggcttcaccaaggaggagcgtgacggcttcaccaccctg
ctggccgaagggttcatcgacagcttccgccacctgtatcccgacgctccttatgcctac
accttctggacttacatgatgaattgccgggccaagaatgtgggctggaggcttgattat
tttgtgctctccgagcccctggtggccaacctgtgcgatagcaagatcaggtcaaaggcc
atggggagcgaccactgtgccatcacgctctacatggcaatctga
DBGET
integrated database retrieval system
