Latimeria chalumnae (coelacanth): 102356129
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Entry
102356129 CDS
T02913
Symbol
FUBP1
Name
(RefSeq) far upstream element binding protein 1
KO
K13210
far upstream element-binding protein
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102356129 (FUBP1)
03041 Spliceosome [BR:
lcm03041
]
102356129 (FUBP1)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
102356129 (FUBP1)
Spliceosome [BR:
lcm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102356129 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
102356129
NCBI-ProteinID:
XP_005998990
Ensembl:
ENSLACG00000012547
LinkDB
All DBs
Position
Un
AA seq
657 aa
AA seq
DB search
MKFCCFLFFFLAQIAAKIGSDTGSTLNSNDYGYGGQKRPLEDGDDSWTSLSSRTYWEGMP
SPFKDQPDAKKVASQGDPFGAQLPPMHQQQRSVMTEEYKIPDGMVGFIIGRGGEQISRIQ
QDSGCKIQIAPDSGGLPERSCMLTGTPESVQAAKRLLDQIVEKGRPGPGFHHLDGPGGAV
QEIMVPASKAGLVIGKGGETIKQLQERAGVKMVMIQEGPQNTGADKPLRITGDPYKVQQA
KEMVLELIRDQGGFRDARNEYGSRIGGNEGIEVPIPRFTVGIVIGRNGEMIKKIQNDAGV
RIQFKPDDGTTPDRIAQITGPPDRCQHAAEIIADLLRSVQAGNPGGPGPGGRGRGRGQGN
WNMGPPGGLQEFSFTVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNLKMF
TVRGSPQQIDYARQLIEEKIGGPVNPLGPPGPHGPHGGPGPHGPPGPPGPGNPMGPYNPG
PYNPGPPGPAPHVPPAPYAPQGWGNAYPHWQQQNPQDPSKAAADANAAAWAAYYAQYYQQ
QAQQPPGASTTSQSATQANGQGDQQKTNQSGQTDYTKAWEEYYKKLGQQGPTQDYAKAWE
EYYKKQGQAAQAPGTAPPGGQPDYSAAWAEYYRQQAAYYSQTSPQGMPQHPPAQQGQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctgttgttttttgtttttttttcttgcacagattgctgctaaaattggtagt
gatacaggaagtaccttaaattccaatgactatggatatggtgggcagaagagacccctt
gaggacggagatgactcttggacaagtctgagcagtagaacatactgggagggaatgccc
tctccttttaaagatcagccagatgccaagaaagttgcttctcagggtgacccttttggt
gcacaacttcctccaatgcatcaacagcagaggtccgttatgacagaggaatataaaatt
ccagatggcatggttggatttataatagggcgagggggtgaacagatttctcgcatacag
caggattcaggatgcaaaattcagatcgctcctgatagtggtggactacctgaaagatct
tgcatgttaactggaactcctgaatcagttcaagctgcgaagaggttacttgatcagata
gttgaaaaagggagacctgggcctgggttccatcacttagacggaccaggaggcgcagtt
caagaaatcatggttcctgctagtaaggctgggttggtaattggaaaaggaggagaaacc
atcaaacaattgcaggagcgtgcaggagtcaagatggtaatgattcaagaggggccacag
aacactggagcagataagcctcttaggataacaggagacccttacaaggttcagcaagct
aaggagatggtgctagaactgattcgtgaccaaggagggtttagagatgcgcggaatgaa
tatgggtcgagaataggaggaaatgaagggatagaagttcctataccacgattcactgtt
ggtattgtaattggaagaaatggagaaatgattaagaagatacagaatgatgctggtgtt
agaattcagtttaaaccagatgatggaacaacaccagatagaatagcccaaatcactggg
cctccagacagatgtcagcatgcagcagaaatcattgcagatcttcttcgaagtgtacag
gcaggtaatcctggtggtcctggacctggtggacgaggacgagggagaggtcaaggcaac
tggaacatgggcccacctggtggactgcaggagttcagttttacagttcccactggcaaa
actggactaatcattggcaaaggtggtgaaacaataaaaagtataagtcagcagtctggt
gccagaatagagcttcagagaaacccacctccaaacgctgaccccaacttgaaaatgttt
acagttcgtgggtcaccgcaacagattgattatgctaggcaacttattgaagaaaaaatt
ggtggtccagtaaatcctttgggcccaccaggtcctcatgggcctcatggtggccctggc
ccacatggccctcccggcccccctggtcctggaaatcctatgggaccatataatcctgga
ccatacaacccaggcccacctggaccagcacctcacgttcctcctgctccatatgctcca
caaggatgggggaatgcatacccacattggcagcagcagaacccacaagatccaagtaaa
gctgcagcagatgctaacgcagcagcatgggcagcatattatgctcagtattatcaacag
caagcacagcagccacctggagcttcaactactagtcagagtgcaacccaagctaatggg
caaggtgaccaacagaaaacaaatcagagtgggcagactgattacactaaagcttgggag
gagtattacaagaaactaggccaacaaggaccaacacaagattatgcaaaggcttgggaa
gaatattacaagaaacaaggtcaagccgctcaagctcctggtactgctccaccaggaggt
caaccagactacagcgctgcatgggcagaatactacaggcaacaggctgcgtattatagc
cagacaagccctcagggaatgccgcagcatcctccagctcagcagggccagtaa
DBGET
integrated database retrieval system
