KEGG   Latimeria chalumnae (coelacanth): 102356245
Entry
102356245         CDS       T02913                                 
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta 4
  KO
K06245  laminin, beta 4
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04510  Focal adhesion
lcm04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102356245 (LAMB4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102356245 (LAMB4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 LAMB4 Nuf2_DHR10-like MscS_porin F5_F8_type_C Laminin_II
Other DBs
NCBI-GeneID: 102356245
NCBI-ProteinID: XP_006008498
Ensembl: ENSLACG00000003537
LinkDB
Position
Un
AA seq 1811 aa
MGLHIFFAIGITLLHFVHTQDECSYSSCHPVLGDLLIGRSAHLSASSTCGLNGPKKYCII
GYLEGEQKCFICDSRLPYNRLSNPYSHRIENVIATFGPDEKKKWWQSANGVHSVSIQLDL
ETLFQFSHLILRFKTFRPAAMLVERSTDYGRTWKVFRYFAQDCASTYPNIPTGQAQRVED
VICESRYSDIEPSTDGEVVLKALDPNFEIENPYSPHIQELITITNLRINFTKLHTLGDTL
LGRGQNDPVEKYYYALYEMIVRGSCFCNGHASQCIPAENVRGDVFNVEGMVHGRCVCEHN
TDGLNCERCKDFYNDVPWRPAEGSQVNGCRECNCNGHSTRCHFDMAVYQAGGSIRGGVCD
DCQHNTMGINCDQCKPYFYQDPLRLITDPQACISCNCDPEGTLSDGMCQAHTDPSLGMIA
GRCLCKENVEGMRCDRCRSGHFRLRADDPLGCQSCRCNPLGSVSSTCDAVTGECICQRLV
TGRLCNQCFPEHWGLGSNLYGCSPCDCDIGGAHNNLCSSTDGQCECLPNIVGRQCNEPSP
GYFFAPLDYYLYEAENAQPLGESASLVKPSILPNCDMFYRQRGYDFKVENGAILLHKLKK
RSLRQRRQVERPIPLNQDSPVQVVFRERSTDKPTTWTGPGFARALDGAGLRFTINNIPYP
MDFIIAIRYEPESSEDWKAVITVNPNGIPKSDHCRNKLPIQEVITVPLTAAVRLAIASTP
VCLEPEMEYFIDIYVSQSSGSNLQSNSYILVDSLGLIPRIASLENFCRKTELEEFVKYEC
IEIASEVGSRTLPDVCEKLISSMSARIHNGAVQCRCNPQGSVSPICSKFGGQCQCKTNVI
GRCCDTCTTGSYGFGPNGCSSCDCDPRGSISSICDQLTGQCACRSEIYGRRCDQCQPGYF
GFPNCRPCQCNGFAELCDPQTGVCLNCRGFTTGNNCERCIDGYYGTPLLRQPCRPCLCPD
TPDSGRYFAYSCYQDPRNQELICNCLEGYTGTHCNKCPAGSYGALQRPGDKCSPCPCSNN
IEKADPNACNTITGECLKCLYNTYGPNCQYCKPGYFGSALNQDCRRCACNPLGTDPRSCP
TSYEACECDQVTGQCPCLPNVIGTNCGQCDSGYWNLDSGNGCQNCDCDPQNSLSNQCNQF
TGQCPCRLGYGGRRCDECQENFFGNPQFECISCNCDLQGTQRPVCDKNTGICNCKVGVTG
KLCDECARGFQQEFPVCTRCHPCFDQWDTELGSISITLEKLIMLNSSLQDGKLQPNYDKQ
LKQLEDKLDKIQTILNSPFLSVDEFQNVKEYFDNIRKKAEQINLSLNPVTALPMLKKTIA
EISNETDRLHEFHDEFQKNLSLHKLNNYSSTLGSYKDIRKSYEKSLAAEKKVNGTDPFII
NSKDKRNKTIALLNNITVLRNNESPEKLKKKVKSLDVVKLNNILCGEPGNLSCSEAICGG
ALCRNDDGSRKCGGLNCTGALSLAKNVFDRTVHTDTLIRNLTRELRDSENQIDEVKRIAE
DAKNKASNLSDKIAQIKDYYEKEKEQTKALIMNVKTFLTDTGIPPEDIEKVANYVLSIQP
PKTPEQLNDLLKQIKAFMSKCDEYENDINKLKKQAEEAEKLLKKANETQIAAANLPDLEE
LKNNLENAEKTQGKVRSALNKTLNDLEDVNVKISKTNDTVEQINDKLMDLNNTLYDLNQK
IDNVKNKTEMNRQQAEEAKEAAEAAQANATEANALLANVTSLYKTLKEQLKGKGEPKDAI
KKAKDLQTEAEELLKNITKKTKRLSELEQKITHLNKAKEDKAKQIEALENQVIEIKKNIT
SATERYATCTP
NT seq 5436 nt   +upstreamnt  +downstreamnt
atggggttgcacattttctttgccataggaattacactgctacattttgtacacactcaa
gatgaatgcagttatagctcatgtcacccagtccttggagatcttcttattggccgcagt
gcccacctgtcagcttcttcaacctgtggactgaatgggcctaaaaagtattgcattata
ggatacttggagggtgaacagaaatgcttcatttgtgattccagacttccttataatcgt
ttaagtaacccctatagccatcgcattgagaatgtcatcgctacatttggaccagatgaa
aaaaagaagtggtggcagtcagccaatggtgttcattctgtcagcattcaactggacttg
gaaacactctttcagtttagtcaccttattttgaggtttaagactttccgtcctgctgca
atgttagttgaacgatctacagattatggaagaacatggaaggttttcagatattttgcc
caagactgtgcttccacttatcccaacattcccactggtcaggcacaaagagtagaagat
gtgatttgtgaatcacgatactcggatattgaaccttccactgatggagaggttgttttg
aaggcactggatcccaattttgaaatagaaaatccttacagcccacatatacaggagctt
attaccatcacaaacctaagaataaactttaccaaacttcacactcttggagatactcta
ctaggcagagggcaaaacgatcctgtggaaaagtattactatgccctttatgagatgatt
gttcgtggtagctgcttctgtaatggccatgccagtcagtgtataccagcagaaaatgta
cgaggtgatgtttttaatgtagaaggaatggtccatggcagatgcgtctgtgagcataac
actgatggtttaaactgcgagagatgtaaagacttttacaatgatgtaccctggagacca
gctgaaggatctcaagttaatggatgccgagagtgtaactgcaatggccattcaactaga
tgtcactttgacatggcagtttaccaagctggtggtagcatacgtggtggagtatgtgat
gattgtcaacacaacacaatgggaatcaactgtgaccagtgcaaaccttacttttatcaa
gaccctctaaggctaattactgaccctcaggcttgtatctcctgtaactgtgacccagaa
ggaacattatccgatgggatgtgccaagctcacacagatccatcccttgggatgattgcc
ggcagatgcttatgtaaggaaaatgttgagggaatgagatgtgatcgatgcaggtctggc
cacttcaggttgagggctgatgatcctcttggctgtcaatcatgcagatgtaatcccttg
ggcagcgtgtcatcaacatgtgatgcagttactggggagtgtatttgccaacgtcttgtc
actggacgtctctgcaatcagtgttttcctgaacactggggacttgggagtaatctgtat
ggttgttctccctgtgactgtgatattggtggagctcataataatttgtgttcctcaaca
gatgggcagtgtgagtgccttcctaacattgtaggccgccagtgtaatgaaccttcccct
ggttacttctttgcaccactggattattatctgtatgaagcagagaatgcacagccactt
ggagagtctgcttctttggttaaaccttccatattgccaaactgtgacatgttctatcgc
cagaggggatatgattttaaagttgagaatggagcgatactcttacacaagctaaagaaa
cgcagtttaagacaaaggagacaagtagagagaccaattccactaaaccaagactctccg
gtacaagttgtttttagagaacgtagcacagacaaaccaactacatggactggacctgga
tttgctcgtgccctagatggagctggcttaaggttcaccatcaacaacattccataccct
atggatttcatcattgccattcgctatgaacctgagtcctctgaagactggaaagctgtt
ataacagtcaatccaaatggcatccctaaaagtgatcactgcagaaacaagttgcctata
caggaagttataacagttcctctgactgctgcagtcagattggcaattgccagtactcct
gtctgccttgagccagaaatggaatattttatagacatttatgtctctcagtcttccggc
tctaacctacagtctaattcctatattttggttgactcacttggtctcattccaaggatt
gcctctttggagaatttctgcagaaaaacagaactagaagaatttgtcaagtatgaatgt
attgaaattgccagtgaagttggatcccggacattgccagatgtgtgtgagaaactgata
tcaagcatgtctgcccgaatacacaatggggcagttcagtgcagatgtaatccacaaggt
tcagttagtccgatctgtagcaaatttggaggacagtgtcaatgtaagacaaacgtgatt
ggcagatgctgtgatacctgcaccactggaagttatgggtttggacctaatggctgttct
tcatgtgactgtgaccctcgaggctccattagctcaatatgtgatcaactgacaggacag
tgtgcttgtcgtagtgaaatttatggtcgtcgttgtgaccaatgtcaacctggttacttt
ggttttccaaactgtcgcccttgtcagtgcaatggcttcgcagaactatgcgatcctcag
actggggtgtgtctgaactgcagagggtttacaactggaaataactgtgagaggtgtatt
gatgggtattatggaacccctctattaaggcaaccttgccgcccatgtttgtgtcctgat
actccagacagtggtcgttattttgcatattcttgttaccaagacccaaggaatcaagaa
cttatctgcaactgccttgaaggctatacaggaactcactgtaacaagtgccctgctggt
tcctatggtgctttgcaaaggcctggggataagtgctccccttgtccctgtagcaataat
atagagaaagcagatcccaatgcttgcaacaccatcacaggagagtgcttgaagtgtttg
tataatacttatgggccaaactgtcagtattgtaaaccaggctactttggatctgccctt
aatcaggactgcaggagatgtgcctgcaacccccttggcacagatcccagaagctgtcca
acctcttatgaagcatgtgaatgtgatcaggtaactggccagtgtccttgcttacctaat
gtgataggcactaactgtggccagtgtgattctggatactggaacttggacagtggaaat
ggatgccaaaattgtgactgtgatccacaaaactcactttccaaccagtgtaatcagttt
actggtcaatgcccatgcagattaggttatggtggaagaaggtgtgatgagtgtcaagaa
aatttctttggaaacccacaatttgaatgtatttcctgtaattgtgatcttcaaggaaca
cagagaccagtatgtgacaaaaacactggcatctgtaactgcaaagtaggtgttactgga
aaattgtgtgatgagtgtgctcgtggctttcaacaggaattcccagtgtgcactcgctgt
cacccatgctttgatcaatgggacactgaattaggctccatttctataacacttgaaaaa
ctgattatgttgaattcaagcttacaggatggaaagctgcagcctaattatgataaacag
ctgaaacagcttgaagacaagttagacaaaatacagacaattctaaacagcccttttcta
tctgtggatgaattccaaaatgtcaaggaatattttgacaacatacgaaaaaaagctgag
cagattaatctaagcctgaatcctgtgactgctttaccaatgctaaaaaaaactattgca
gaaattagtaatgaaacagatagacttcatgaatttcatgatgaattccaaaagaatcta
agtttacacaaacttaacaattacagttcaacactaggttcctacaaggacattaggaaa
tcctatgaaaagtcactggctgcagaaaaaaaagtaaatggcacagatcccttcataata
aactccaaagacaaaaggaataaaaccattgccttattgaacaatattacagtattgaga
aacaatgagtcaccagaaaaattaaagaagaaagttaaatccctggatgttgtaaagcta
aataatattctttgtggagagccaggaaatttgtcatgctctgaggcaatttgcggagga
gctctttgtcgaaatgatgatggaagtagaaaatgtggtggtttaaactgcactggagca
ctctcccttgcaaagaatgtcttcgatagaactgtccatacagacactttaatacgtaac
ctgacccgagagctacgagattcagagaatcagattgatgaggtcaaaagaattgcagaa
gatgccaaaaacaaagcttcaaatttaagtgataaaatcgcacagattaaggactactat
gaaaaagaaaaagaacaaacaaaagcccttattatgaatgtgaaaacattcctaacagat
actggtatacctcctgaagacatagaaaaggttgcaaattatgttttgtccattcagcct
ccaaaaacacctgaacaactaaacgatttacttaagcagattaaagcattcatgtcaaaa
tgtgatgaatatgaaaatgatattaacaagctaaagaagcaagcagaagaggcagagaaa
cttctgaaaaaggcaaatgaaacacagatagcagcagcaaatctcccagaccttgaagaa
ctaaagaacaatttagaaaatgctgaaaagactcaaggaaaagttaggagtgctcttaat
aagacactcaatgacctagaagatgttaacgtcaaaatttcaaagaccaatgatactgta
gaacagattaatgataaactcatggatctgaataatacactatatgacctaaatcagaag
attgacaacgtgaaaaacaagacagaaatgaacaggcagcaggctgaagaggctaaagag
gcagccgaggcagcacaggctaatgccactgaagctaatgcactgttggcaaatgtgact
tctctgtacaaaactttaaaagaacaactgaagggaaaaggagaacccaaggatgcaata
aaaaaagcaaaagatttacagactgaagctgaagaattgctgaagaatattacaaagaaa
actaaaagactatcagaactggaacagaagatcactcatctcaataaagcaaaagaagat
aaagcaaagcagattgaggcgctggagaaccaagtcatagaaattaaaaagaacattacc
agtgcaacagaaagatatgctacctgtaccccttag

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