KEGG   Latimeria chalumnae (coelacanth): 102356435
Entry
102356435         CDS       T02913                                 
Symbol
RBM39
Name
(RefSeq) RNA binding motif protein 39
  KO
K13091  RNA-binding protein 23/39
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102356435 (RBM39)
Spliceosome [BR:lcm03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    102356435 (RBM39)
SSDB
Motif
Pfam: RRM_1 RBM39linker RRM_occluded PRP38_assoc RBD_DEAH11 RRM_7 Transformer
Other DBs
NCBI-GeneID: 102356435
NCBI-ProteinID: XP_014342485
Ensembl: ENSLACG00000018811
LinkDB
Position
Un
AA seq 533 aa
MADDIDIEAMLEAPYRKEETKFSSTNGHEERSKKKKKSRSRSRSHDRRRSKSKDRKRSRD
RERKRSRSRDKKRSRSRDRRRSRSRSRDRRYRGRYRSPFSGPKFNSGIRGKIGLPPNIKL
SRKRSRSRSPYKKEKSPVREPIDNLTPEERDARTVFCMQLAARIRPKDLEEFFSVVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAALAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDGNHASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAGALLGPDLGDLQTRLTQPNEVVSPPLTVP
SQPLATQCFQLSNMFNPQTEDEPGWDQEIKDDVIEECNKHGGVIHIYVDRNSTQGNVYVK
CPTISAAAAAVSALHGRWFAGKMITAAYVPLPTYHNLFPDSLIATQLLMPARR
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcagacgacattgatatagaagcaatgcttgaggctccttacaggaaggaggagaca
aagttcagcagcaccaatgggcatgaggagcgcagtaagaaaaaaaagaagagcagaagc
aggagtcgcagccatgatcgaaggaggagcaaaagcaaagaccgcaagcgtagtcgagac
cgtgaaaggaagagaagcaggagccgtgacaagaaacgcagtcggagtagggaccgaaga
cgcagccgttctcggagcagagatcgcagatataggggacgatatagaagccctttctct
gggccgaaatttaacagtggcatcagagggaagattggcctgccgcccaacatcaaacta
agcagaaaacgctctagaagccgaagtccatacaagaaagagaagagccctgttagagag
cctattgataatttaactcctgaagaaagagatgcccgcacagtgttctgcatgcagctg
gctgcacgtattcgaccaaaagatctggaggagtttttttctgttgtaggcaaagttcgt
gatgtgagaatgatttctgataggaattccaggcgatcaaaaggcattgcttatgtagag
tttgtggatgtgagttctgtgcccctggcaataggactcacaggacagagagtacttgga
gtgccaataattgtacaggcatctcaggctgagaagaacagagcagcagcattggctaat
aatctacaaaagggttctgcaggacccatgagactatatgttggttccttacattttaac
atcacagaagatatgttacggggaatctttgagcctttcggcaggattgaaagtatccag
cttatgatggacagtgagacagggcgttccaaaggatatggatttattactttttcagat
tcggagtgtgccaaaaaggcccttgaacagctaaatggatttgagcttgctggcagaccc
atgaaagttgggcatgtgacagagaggactgatggtaaccatgcaagttcatttctggat
agtgatgagttggagagaactgggattgacttgggaaccactggacgcctgcagctaatg
gctaggcttgcagaaggaacaggattgcagattcctcccgctgcccagcaggctctacag
atgagtgggtctttggcctttggtgctgtggcaggagcacttcttgggccagacttagga
gatttgcagaccagacttacccaaccaaatgaggtggtcagcccacctttgactgtacct
tcacagccccttgcaacacagtgctttcaactgtccaacatgtttaatccacagacggaa
gatgaaccaggctgggaccaagagattaaggatgatgtaattgaagaatgtaacaaacat
gggggagttattcacatatatgtggacaggaattcaactcagggcaacgtgtatgtaaaa
tgtcccactatatcagcagcagctgcagctgtaagtgctttgcatggaagatggtttgca
ggtaaaatgataactgcagcctatgtgccacttccgacgtaccacaatctcttcccggat
tcactgattgccactcagctacttatgccagcccgacgatga

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