Latimeria chalumnae (coelacanth): 102356435
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Entry
102356435 CDS
T02913
Symbol
RBM39
Name
(RefSeq) RNA binding motif protein 39
KO
K13091
RNA-binding protein 23/39
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102356435 (RBM39)
Spliceosome [BR:
lcm03041
]
Common components
Common spliceosomal components
General mRNP proteins
102356435 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
102356435
NCBI-ProteinID:
XP_014342485
Ensembl:
ENSLACG00000018811
LinkDB
All DBs
Position
Un
AA seq
533 aa
AA seq
DB search
MADDIDIEAMLEAPYRKEETKFSSTNGHEERSKKKKKSRSRSRSHDRRRSKSKDRKRSRD
RERKRSRSRDKKRSRSRDRRRSRSRSRDRRYRGRYRSPFSGPKFNSGIRGKIGLPPNIKL
SRKRSRSRSPYKKEKSPVREPIDNLTPEERDARTVFCMQLAARIRPKDLEEFFSVVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAALAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDGNHASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAGALLGPDLGDLQTRLTQPNEVVSPPLTVP
SQPLATQCFQLSNMFNPQTEDEPGWDQEIKDDVIEECNKHGGVIHIYVDRNSTQGNVYVK
CPTISAAAAAVSALHGRWFAGKMITAAYVPLPTYHNLFPDSLIATQLLMPARR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacattgatatagaagcaatgcttgaggctccttacaggaaggaggagaca
aagttcagcagcaccaatgggcatgaggagcgcagtaagaaaaaaaagaagagcagaagc
aggagtcgcagccatgatcgaaggaggagcaaaagcaaagaccgcaagcgtagtcgagac
cgtgaaaggaagagaagcaggagccgtgacaagaaacgcagtcggagtagggaccgaaga
cgcagccgttctcggagcagagatcgcagatataggggacgatatagaagccctttctct
gggccgaaatttaacagtggcatcagagggaagattggcctgccgcccaacatcaaacta
agcagaaaacgctctagaagccgaagtccatacaagaaagagaagagccctgttagagag
cctattgataatttaactcctgaagaaagagatgcccgcacagtgttctgcatgcagctg
gctgcacgtattcgaccaaaagatctggaggagtttttttctgttgtaggcaaagttcgt
gatgtgagaatgatttctgataggaattccaggcgatcaaaaggcattgcttatgtagag
tttgtggatgtgagttctgtgcccctggcaataggactcacaggacagagagtacttgga
gtgccaataattgtacaggcatctcaggctgagaagaacagagcagcagcattggctaat
aatctacaaaagggttctgcaggacccatgagactatatgttggttccttacattttaac
atcacagaagatatgttacggggaatctttgagcctttcggcaggattgaaagtatccag
cttatgatggacagtgagacagggcgttccaaaggatatggatttattactttttcagat
tcggagtgtgccaaaaaggcccttgaacagctaaatggatttgagcttgctggcagaccc
atgaaagttgggcatgtgacagagaggactgatggtaaccatgcaagttcatttctggat
agtgatgagttggagagaactgggattgacttgggaaccactggacgcctgcagctaatg
gctaggcttgcagaaggaacaggattgcagattcctcccgctgcccagcaggctctacag
atgagtgggtctttggcctttggtgctgtggcaggagcacttcttgggccagacttagga
gatttgcagaccagacttacccaaccaaatgaggtggtcagcccacctttgactgtacct
tcacagccccttgcaacacagtgctttcaactgtccaacatgtttaatccacagacggaa
gatgaaccaggctgggaccaagagattaaggatgatgtaattgaagaatgtaacaaacat
gggggagttattcacatatatgtggacaggaattcaactcagggcaacgtgtatgtaaaa
tgtcccactatatcagcagcagctgcagctgtaagtgctttgcatggaagatggtttgca
ggtaaaatgataactgcagcctatgtgccacttccgacgtaccacaatctcttcccggat
tcactgattgccactcagctacttatgccagcccgacgatga
DBGET
integrated database retrieval system